Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 1.9e-132 476.5 379 100.0
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.9e-71 273.9 388 61.6
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.1e-55 221.5 400 44.8
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 1.8e-53 214.2 369 44.7
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.1e-50 204.9 371 46.1
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 2.8e-46 190.3 365 42.7
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 1.4e-45 188.0 364 51.1
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 6.8e-45 185.7 329 48.3
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 3.4e-44 183.3 410 47.8
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 5.8e-44 182.6 369 45.5
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.3e-43 181.4 351 42.5
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-42 177.2 350 42.6
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 5.4e-42 176.0 346 49.1
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 7.0e-42 175.6 350 41.7
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.2e-41 174.9 338 52.4
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 3.5e-41 173.3 374 40.6
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 4.6e-41 172.9 323 44.3
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 4.6e-41 172.9 323 44.3
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 1.1e-39 168.3 364 37.4
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.1e-39 168.3 363 37.7
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 4.3e-39 166.4 366 40.7
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 2.3e-37 160.6 364 42.3
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 4.4e-36 156.4 354 38.4
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 9.9e-36 155.2 307 44.6
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 5.1e-32 142.9 347 36.0
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.1e-32 142.9 340 40.0
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 6.6e-32 142.5 340 44.1
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.5e-31 138.7 340 43.5
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.1e-30 135.6 375 35.5
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 1.4e-29 134.8 330 41.8
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.2e-28 131.7 375 35.7
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.2e-28 131.7 375 35.7
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.0e-28 131.0 365 35.9
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 5.8e-28 129.4 285 55.1
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 4.9e-27 126.3 354 38.4
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 2.4e-26 124.0 344 40.1
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 4.2e-26 123.2 327 35.5
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 4.6e-25 119.8 358 43.6
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 5.1e-24 116.3 336 36.3
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.5e-23 114.0 387 30.2
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 5.6e-23 112.8 381 42.8
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 3.6e-22 110.2 343 43.7
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 6.2e-22 109.4 335 34.0
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 3.1e-21 107.1 346 32.1
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 6.9e-21 105.9 350 29.4
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.5e-20 104.8 333 33.3
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 5.8e-20 102.8 357 36.4
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 2.2e-19 100.9 197 50.8
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 2.9e-19 100.5 339 31.9
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 1.9e-18 97.8 344 39.2
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 2.4e-18 97.4 373 29.8
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 2.4e-18 97.4 335 38.2
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 5.4e-18 96.3 330 29.1
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 7.1e-18 95.9 206 39.8
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 2.1e-17 94.4 362 35.6
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 2.7e-17 94.0 200 43.0
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 3.5e-17 93.6 328 31.7
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.0e-16 92.0 358 29.3
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 1.0e-16 92.0 339 39.8
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 1.0e-16 92.0 351 35.0
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 3.9e-16 90.1 330 32.1
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 3.9e-16 90.1 134 53.7
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 5.1e-16 89.7 341 35.2
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 5.1e-16 89.7 373 29.0
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.7e-16 89.0 295 29.2
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 8.7e-16 89.0 276 28.6
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.1e-15 88.6 341 33.7
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 1.5e-15 88.2 366 32.8
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 4.3e-15 86.7 383 35.2
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 5.6e-15 86.3 341 45.5
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.3e-15 85.9 276 27.9
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 7.3e-15 85.9 332 29.8
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 1.3e-14 85.1 352 34.4
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 4.8e-14 83.2 384 30.2
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.1e-13 82.0 336 30.1
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 3.1e-13 80.5 347 34.0
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 4.0e-13 80.1 350 31.4
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 4.0e-13 80.1 395 40.5
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 5.3e-13 79.7 150 54.0
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 6.9e-13 79.3 294 26.9
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 6.9e-13 79.3 361 36.8
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 1.2e-12 78.6 360 32.5
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 1.5e-12 78.2 232 47.8
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 2.0e-12 77.8 319 44.8
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 2.0e-12 77.8 345 29.9
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 2.0e-12 77.8 342 30.7
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 2.0e-12 77.8 342 30.7
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 2.6e-12 77.4 219 39.3
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 5.8e-12 76.3 342 30.4
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 9.9e-12 75.5 339 31.3
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 1.3e-11 75.1 367 34.6
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.3e-11 75.1 367 34.6
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.3e-11 75.1 367 34.6
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 2.2e-11 74.3 344 32.3
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.2e-11 74.3 248 44.8
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 4.9e-11 73.2 101 45.5
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 6.4e-11 72.8 363 33.3
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 1.4e-10 71.6 208 31.2
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 1.4e-10 71.6 337 26.7
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.4e-10 71.6 333 27.9
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 7.1e-10 69.3 208 31.2
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 7.1e-10 69.3 206 32.5
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.2e-09 68.6 97 45.4
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.6e-09 68.2 193 53.9
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.6e-09 68.2 373 25.7
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 2.7e-09 67.4 193 31.1
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 4.6e-09 66.6 200 57.5
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 4.6e-09 66.6 366 29.2
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 6.0e-09 66.2 333 31.2
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 1.0e-08 65.5 340 30.0
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 1.8e-08 64.7 203 32.0
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 1.8e-08 64.7 203 32.0
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 3.0e-08 63.9 192 52.6
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 3.9e-08 63.5 349 29.2
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 3.9e-08 63.5 219 31.5
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 6.7e-08 62.8 202 31.7
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 6.7e-08 62.8 359 29.8
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 8.7e-08 62.4 348 29.6
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 1.9e-07 61.2 195 48.2
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 9.6e-07 58.9 131 36.6
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 1.3e-06 58.5 201 30.3
Nitab4.5_0005127g0050 Nicotiana tabacum HOM05D005407 ORTHO05D006544 1.6e-06 58.2 98 42.9
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 4.8e-06 56.6 163 36.8


User provided reference genes

Program Settings