Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 5.7e-62 240.7 121 100.0
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 2.3e-34 149.1 123 69.9
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.2e-19 100.1 122 54.1
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 9.5e-17 90.5 123 48.0
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 9.5e-17 90.5 123 50.4
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 1.6e-16 89.7 122 46.7
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 1.6e-16 89.7 121 47.9
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 2.8e-16 89.0 120 45.8
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 8.1e-16 87.4 126 46.0
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 3.4e-14 82.0 123 45.5
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 9.8e-14 80.5 122 46.7
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.2e-13 79.3 126 42.1
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 1.1e-12 77.0 121 43.0
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 1.4e-12 76.6 121 43.0
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.9e-12 76.3 133 41.4
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 2.4e-12 75.9 123 46.3
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 9.2e-12 73.9 123 41.5
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.2e-11 73.6 128 35.9
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 2.1e-11 72.8 124 40.3
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 7.8e-11 70.9 121 39.7
Nitab4.5_0001064g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.0e-10 70.5 128 38.3
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 5.1e-10 68.2 125 40.8
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 5.1e-10 68.2 125 40.8
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 6.6e-10 67.8 129 38.8
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 1.9e-09 66.2 114 43.9
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 3.3e-09 65.5 125 37.6
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 5.6e-09 64.7 123 37.4
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 7.3e-09 64.3 121 37.2
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 1.6e-08 63.2 122 40.2
Phvul.003G245400 Phaseolus vulgaris HOM05D008581 ORTHO05D009966 2.8e-08 62.4 123 37.4
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.6e-08 62.0 128 39.1
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 8.1e-08 60.8 123 38.2
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 1.4e-07 60.1 119 42.0
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 1.8e-07 59.7 121 34.7
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 3.1e-07 58.9 134 37.3
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 4.0e-07 58.5 120 41.7
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 5.2e-07 58.2 121 36.4
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 5.2e-07 58.2 124 39.5
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 6.8e-07 57.8 121 37.2
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 8.9e-07 57.4 121 33.9
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 8.9e-07 57.4 121 33.9
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 8.9e-07 57.4 111 40.5
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.2e-06 57.0 117 40.2
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.2e-06 57.0 122 35.2
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.2e-06 57.0 123 35.0
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 1.5e-06 56.6 120 41.7
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.5e-06 56.6 127 35.4
CiPaw.01G020000 Carya illinoinensis HOM05D015383 ORTHO05D009966 2.0e-06 56.2 115 37.4
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 5.8e-06 54.7 121 32.2
Nitab4.5_0013032g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 5.8e-06 54.7 127 34.6
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 7.6e-06 54.3 125 32.8
QL06p042049 Quercus lobata HOM05D008581 ORTHO05D009966 7.6e-06 54.3 114 39.5


User provided reference genes

Program Settings