Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G094400 Manihot esculenta HOM05D058365 ORTHO05D010755 1.7e-103 379.4 196 100.0
Manes.12G094300 Manihot esculenta HOM05D058365 ORTHO05D010755 1.0e-81 307.0 189 86.2
BcaB01g00614 Brassica carinata HOM05D008738 ORTHO05D010755 5.7e-11 72.0 213 29.6
Thhalv10010714m.g Eutrema salsugineum HOM05D008738 ORTHO05D010755 9.7e-11 71.2 195 28.7
BolC8t50176H Brassica oleracea HOM05D008738 ORTHO05D010755 2.2e-10 70.1 212 30.2
Dinv29949 Davidia involucrata HOM05D000529 ORTHO05D000472 4.8e-10 68.9 172 29.1
AL5G30620 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 6.3e-10 68.6 210 28.1
AT3G50470 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 6.3e-10 68.6 209 28.2
BraA09t39815Z Brassica rapa HOM05D008738 ORTHO05D010755 8.2e-10 68.2 209 30.6
AL5G30600 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.1e-09 67.8 194 30.4
BcaC07g39509 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-09 67.8 209 27.8
BcaC07g39511 Brassica carinata HOM05D008738 ORTHO05D010755 1.1e-09 67.8 212 30.7
Dinv29950 Davidia involucrata HOM05D000529 ORTHO05D000472 1.4e-09 67.4 164 31.1
BcaB01g00613 Brassica carinata HOM05D008738 ORTHO05D010755 3.1e-09 66.2 207 29.0
A09p43500 Brassica napus HOM05D008738 ORTHO05D010755 3.1e-09 66.2 209 29.2
AL5G30610 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 1.5e-08 63.9 202 26.2
AT3G50460 Arabidopsis thaliana HOM05D008738 ORTHO05D010755 2.0e-08 63.5 197 23.9
Carub.0005s1680 Capsella rubella HOM05D008738 ORTHO05D010755 2.0e-08 63.5 206 28.6
CARHR159990 Cardamine hirsuta HOM05D008738 ORTHO05D010755 2.6e-08 63.2 216 29.6
Ciclev10024907m.g Citrus clementina HOM05D000529 ORTHO05D000472 3.4e-08 62.8 110 36.4
A09p43510 Brassica napus HOM05D008738 ORTHO05D010755 5.9e-08 62.0 211 29.4
C08p25550 Brassica napus HOM05D008738 ORTHO05D010755 7.7e-08 61.6 212 29.7
Nn5g29352 Nelumbo nucifera HOM05D000529 ORTHO05D000472 1.0e-07 61.2 121 33.1
CARHR159980 Cardamine hirsuta HOM05D008738 ORTHO05D010755 1.3e-07 60.8 201 26.4
Carub.0005s1679 Capsella rubella HOM05D008738 ORTHO05D010755 1.7e-07 60.5 187 26.7
Cc07_g05700 Coffea canephora HOM05D000529 ORTHO05D000472 1.7e-07 60.5 143 26.6
Phvul.003G247601 Phaseolus vulgaris HOM05D000529 ORTHO05D000472 1.7e-07 60.5 116 31.9
Prupe.7G139800 Prunus persica HOM05D000529 ORTHO05D000472 1.7e-07 60.5 140 28.6
AL5G30630 Arabidopsis lyrata HOM05D008738 ORTHO05D010755 2.2e-07 60.1 202 27.2
Lj4g0017861 Lotus japonicus HOM05D000529 ORTHO05D000472 2.9e-07 59.7 134 28.4
A09p43530 Brassica napus HOM05D008738 ORTHO05D010755 6.5e-07 58.5 210 29.0
Nn4g24847 Nelumbo nucifera HOM05D000529 ORTHO05D000472 6.5e-07 58.5 118 33.9
BraA09t39816Z Brassica rapa HOM05D008738 ORTHO05D010755 8.5e-07 58.2 203 27.6
Ciclev10018897m.g Citrus clementina HOM05D000529 ORTHO05D000472 1.4e-06 57.4 104 36.5
Cc07_g05690 Coffea canephora HOM05D000529 ORTHO05D010311 1.4e-06 57.4 138 29.0
PSO210G7782 Papaver somniferum HOM05D000033 ORTHO05D030421 1.4e-06 57.4 177 26.6
FvH4_1g15500 Fragaria vesca HOM05D000529 ORTHO05D000472 1.9e-06 57.0 105 32.4
arahy.Tifrunner.gnm1.ann1.KL9X3Y Arachis hypogaea HOM05D003581 ORTHO05D004332 2.5e-06 56.6 119 31.9
Prupe.7G140100 Prunus persica HOM05D008738 ORTHO05D010755 4.2e-06 55.8 127 31.5
DCAR_021433 Daucus carota HOM05D000529 ORTHO05D000472 5.5e-06 55.5 146 25.3
GSVIVG01003565001 Vitis vinifera HOM05D000529 ORTHO05D000472 5.5e-06 55.5 172 29.1
Prupe.7G139100 Prunus persica HOM05D000529 ORTHO05D000472 7.2e-06 55.1 129 27.9
Lalb_Chr05g0226851 Lupinus albus HOM05D000529 ORTHO05D000472 9.4e-06 54.7 116 32.8


User provided reference genes

Program Settings