Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 4.8e-125 451.4 271 100.0
Potri.017G015700 Populus trichocarpa HOM05D008876 ORTHO05D010747 2.6e-30 136.7 386 41.2
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 8.6e-26 121.7 293 45.4
Ciclev10016096m.g Citrus clementina HOM05D008876 ORTHO05D010747 6.2e-24 115.5 309 44.7
Potri.007G137001 Populus trichocarpa HOM05D008876 ORTHO05D010747 2.4e-23 113.6 458 37.1
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 4.0e-23 112.8 267 37.8
Sabra17G0012100 Salix brachista HOM05D008876 ORTHO05D010747 5.2e-23 112.5 422 38.6
Thecc.02G185800 Theobroma cacao HOM05D008876 ORTHO05D010747 1.7e-21 107.5 272 44.1
Duzib132G0209 Durio zibethinus HOM05D008876 ORTHO05D010747 2.2e-21 107.1 273 38.8
Duzib132G0342 Durio zibethinus HOM05D008876 ORTHO05D010747 2.2e-21 107.1 273 38.8
QL08p040130 Quercus lobata HOM05D008876 ORTHO05D010747 1.9e-17 94.0 272 43.4
Gohir.A03G154600 Gossypium hirsutum HOM05D008876 ORTHO05D010747 5.3e-15 85.9 280 42.5
Gohir.D02G177500 Gossypium hirsutum HOM05D008876 ORTHO05D010747 6.9e-15 85.5 275 43.6
Ca_01482_v3 Cicer arietinum L. HOM05D008876 ORTHO05D010747 9.0e-15 85.1 276 40.2
Gorai.005G199300 Gossypium raimondii HOM05D008876 ORTHO05D010747 3.4e-14 83.2 279 43.4
Lalb_Chr22g0356741 Lupinus albus HOM05D008876 ORTHO05D010747 3.4e-14 83.2 266 36.1
Glyma.13G294400 Glycine max HOM05D008876 ORTHO05D010747 5.8e-14 82.4 291 39.9
Dinv01518 Davidia involucrata HOM05D008876 ORTHO05D010747 1.3e-13 81.3 276 40.9
Hma1.2p1_0002F.1_g002230 Hydrangea macrophylla HOM05D008876 ORTHO05D010747 6.4e-13 79.0 281 33.1
Dinv06861 Davidia involucrata HOM05D008876 ORTHO05D010747 1.9e-12 77.4 257 38.9
Prupe.3G134900 Prunus persica HOM05D020475 ORTHO05D010747 2.4e-12 77.0 291 37.8
TWI59G0664 Tripterygium wilfordii HOM05D008876 ORTHO05D010747 3.5e-11 73.2 268 39.9
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 5.1e-10 69.3 277 32.9
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 1.1e-09 68.2 289 30.4
Actinidia11002 Actinidia chinensis HOM05D008876 ORTHO05D010747 2.5e-09 67.0 112 45.5
CiPaw.03G181200 Carya illinoinensis HOM05D008876 ORTHO05D010747 4.3e-09 66.2 268 36.6
MD09G1241900 Malus domestica HOM05D020475 ORTHO05D010747 4.3e-09 66.2 288 34.4
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 5.6e-09 65.9 281 32.0
Phvul.005G100800 Phaseolus vulgaris HOM05D008876 ORTHO05D010747 5.6e-09 65.9 361 30.2
Lj3g0013370 Lotus japonicus HOM05D008876 ORTHO05D010747 9.6e-09 65.1 280 31.8
PGR042G1564 Punica granatum HOM05D008876 ORTHO05D010747 1.3e-08 64.7 298 32.6
Thhalv10008747m.g Eutrema salsugineum HOM05D010571 ORTHO05D012729 1.6e-08 64.3 257 31.5
Actinidia11106 Actinidia chinensis HOM05D008876 ORTHO05D010747 2.1e-08 63.9 112 43.8
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.1e-08 63.9 264 29.5
FAN14G3778 Fragaria x ananassa HOM05D020475 ORTHO05D010747 2.8e-08 63.5 303 33.0
TPR.G6423 Trifolium pratense HOM05D008876 ORTHO05D010747 2.8e-08 63.5 287 33.1
FvH4_6g26650 Fragaria vesca HOM05D020475 ORTHO05D010747 6.2e-08 62.4 302 32.5
Cpa.g.sc83.91 Carica papaya HOM05D008876 ORTHO05D010747 8.1e-08 62.0 60 51.7
FAN09G4445 Fragaria x ananassa HOM05D020475 ORTHO05D022619 1.4e-07 61.2 69 55.1
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 2.4e-07 60.5 303 27.7
FAN02G4612 Fragaria x ananassa HOM05D020475 ORTHO05D022619 3.1e-07 60.1 291 31.6
C05p02170 Brassica napus HOM05D010571 ORTHO05D012729 5.3e-07 59.3 259 29.3
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 5.3e-07 59.3 287 31.0
BcaC05g24504 Brassica carinata HOM05D010571 ORTHO05D012729 6.9e-07 58.9 260 30.4
Cfa014657 Carpinus fangiana HOM05D008876 ORTHO05D010747 6.9e-07 58.9 193 38.3
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 6.9e-07 58.9 290 32.8
C08p00780 Brassica napus HOM05D010571 ORTHO05D012729 1.2e-06 58.2 259 29.3
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 2.0e-06 57.4 256 33.2
AL1G13380 Arabidopsis lyrata HOM05D010571 ORTHO05D012729 2.6e-06 57.0 260 30.8
A08p37220 Brassica napus HOM05D010571 ORTHO05D012729 2.6e-06 57.0 260 29.2
BolC8t46876H Brassica oleracea HOM05D010571 ORTHO05D012729 2.6e-06 57.0 259 29.3
BolC5t28995H Brassica oleracea HOM05D010571 ORTHO05D012729 4.5e-06 56.2 259 29.0
BcaC07g36944 Brassica carinata HOM05D010571 ORTHO05D012729 7.6e-06 55.5 259 28.2
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 9.9e-06 55.1 80 51.2


User provided reference genes

Program Settings