Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G085400 Manihot esculenta HOM05D008701 ORTHO05D010238 4.1e-151 538.1 284 100.0
Potri.013G149300 Populus trichocarpa HOM05D008701 ORTHO05D010238 4.8e-27 125.9 316 36.4
Potri.019G119000 Populus trichocarpa HOM05D008701 ORTHO05D010238 3.4e-25 119.8 301 36.9
COL.COLO4_06754 Corchorus olitorius HOM05D008701 ORTHO05D010238 1.9e-23 114.0 280 34.3
Duzib132G0833 Durio zibethinus HOM05D008701 ORTHO05D010238 1.3e-19 101.3 276 34.4
Thecc.02G167700 Theobroma cacao HOM05D008701 ORTHO05D010238 4.8e-19 99.4 282 31.9
Gorai.005G206900 Gossypium raimondii HOM05D008701 ORTHO05D010238 2.4e-18 97.1 280 30.0
Sabra13G0120500 Salix brachista HOM05D008701 ORTHO05D010238 2.4e-18 97.1 281 34.9
Duzib052G1245 Durio zibethinus HOM05D008701 ORTHO05D010238 6.9e-18 95.5 279 32.6
FvH4_6g44330 Fragaria vesca HOM05D008701 ORTHO05D010238 1.3e-16 91.3 284 32.7
FAN14G1396 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.3e-16 91.3 284 32.7
FAN09G1417 Fragaria x ananassa HOM05D008701 ORTHO05D010238 1.7e-16 90.9 286 31.8
Prupe.3G227700 Prunus persica HOM05D008701 ORTHO05D010238 1.7e-16 90.9 288 33.0
RcHm_v2.0_Chr2g0161211 Rosa chinensis HOM05D008701 ORTHO05D010238 6.5e-16 89.0 294 31.6
Gohir.D02G184600 Gossypium hirsutum HOM05D008701 ORTHO05D010238 8.5e-16 88.6 276 29.7
FAN02G3791 Fragaria x ananassa HOM05D008701 ORTHO05D010238 7.2e-15 85.5 283 32.2
FAN05G0248 Fragaria x ananassa HOM05D008701 ORTHO05D010238 2.1e-14 84.0 288 30.9
Dinv02575 Davidia involucrata HOM05D008701 ORTHO05D028399 2.7e-14 83.6 271 32.8
TAR626G1447 Trochodendron aralioides HOM05D008701 ORTHO05D010238 3.3e-12 76.6 291 29.6
Gohir.A03G161300 Gossypium hirsutum HOM05D008701 ORTHO05D010238 5.7e-12 75.9 276 27.9
Haze_13046 Corylus avellana HOM05D008701 ORTHO05D010238 2.2e-11 73.9 282 30.9
MD17G1087000 Malus domestica HOM05D008701 ORTHO05D010238 2.4e-10 70.5 279 31.5
MD09G1098800 Malus domestica HOM05D008701 ORTHO05D010238 9.1e-10 68.6 281 31.7
Cfa014502 Carpinus fangiana HOM05D008701 ORTHO05D010238 1.6e-09 67.8 285 28.8
Sabra16G0271700 Salix brachista HOM05D006433 ORTHO05D005382 3.5e-09 66.6 280 28.6
Sabra16G0276700 Salix brachista HOM05D006433 ORTHO05D005382 3.5e-09 66.6 280 28.6
QL08p036307 Quercus lobata HOM05D008701 ORTHO05D010238 1.3e-08 64.7 263 28.9
Gorai.002G016700 Gossypium raimondii HOM05D008701 ORTHO05D010238 1.7e-08 64.3 274 25.9
TWI39G0991 Tripterygium wilfordii HOM05D013385 ORTHO05D005382 1.1e-07 61.6 283 27.6
Nn1g03826 Nelumbo nucifera HOM05D008701 ORTHO05D005382 2.5e-07 60.5 90 43.3
Ciclev10018089m.g Citrus clementina HOM05D008701 ORTHO05D010238 1.6e-06 57.8 165 37.0
Gohir.A01G013700 Gossypium hirsutum HOM05D008701 ORTHO05D010238 2.1e-06 57.4 233 28.3
Gohir.D01G015000 Gossypium hirsutum HOM05D008701 ORTHO05D010238 8.0e-06 55.5 277 25.3


User provided reference genes

Program Settings