Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 5.0e-76 287.7 148 100.0
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 4.3e-35 151.8 139 61.9
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 3.4e-24 115.5 146 45.9
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.1e-21 106.3 160 43.8
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.7e-21 105.9 167 40.1
Potri.018G137700 Populus trichocarpa HOM05D009958 ORTHO05D007393 1.3e-20 103.6 150 50.0
Potri.T045901 Populus trichocarpa HOM05D009958 ORTHO05D007393 5.1e-20 101.7 150 49.3
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 6.6e-20 101.3 160 43.1
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 6.6e-20 101.3 160 43.1
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 5.6e-19 98.2 168 42.3
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 3.6e-18 95.5 175 41.7
Ciclev10026723m.g Citrus clementina HOM05D009958 ORTHO05D007393 1.4e-17 93.6 146 43.8
Sabra19G0000200 Salix brachista HOM05D009958 ORTHO05D007393 4.0e-17 92.0 152 45.4
Gohir.A11G058500 Gossypium hirsutum HOM05D009958 ORTHO05D007393 6.8e-17 91.3 153 43.1
Gorai.007G067700 Gossypium raimondii HOM05D009958 ORTHO05D007393 8.9e-17 90.9 152 43.4
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 1.3e-15 87.0 171 39.8
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 2.9e-15 85.9 172 37.8
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 4.9e-15 85.1 175 38.9
Gohir.D11G062800 Gossypium hirsutum HOM05D009958 ORTHO05D007393 1.1e-14 84.0 152 42.1
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 4.1e-14 82.0 155 40.0
TWI79G1017 Tripterygium wilfordii HOM05D009958 ORTHO05D007393 7.1e-14 81.3 164 38.4
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 1.6e-13 80.1 137 42.3
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 6.0e-13 78.2 159 43.4
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.1e-12 75.1 176 33.5
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.5e-11 72.8 141 37.6
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 3.3e-11 72.4 153 36.6
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 7.3e-11 71.2 171 35.7
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.2e-10 70.5 189 33.3
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 6.2e-10 68.2 151 33.8
Aqoxy2G00980 Aquilegia oxysepala HOM05D009958 ORTHO05D007393 3.1e-09 65.9 138 37.7
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 4.0e-09 65.5 172 34.9
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 4.0e-09 65.5 169 31.4
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 5.2e-09 65.1 185 31.4
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 8.9e-09 64.3 159 34.6
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 1.2e-08 63.9 161 34.8
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.5e-08 63.5 166 28.3
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 2.0e-08 63.2 157 35.0
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 2.0e-08 63.2 182 33.5
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 2.6e-08 62.8 151 33.8
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 3.4e-08 62.4 160 30.0
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 3.4e-08 62.4 164 32.3
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 3.4e-08 62.4 178 34.3
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 4.4e-08 62.0 154 33.8
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 4.4e-08 62.0 172 33.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 4.4e-08 62.0 173 29.5
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 5.8e-08 61.6 159 34.6
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 7.6e-08 61.2 172 33.7
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 7.6e-08 61.2 155 32.9
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 9.9e-08 60.8 158 30.4
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 9.9e-08 60.8 176 34.7
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 1.3e-07 60.5 147 31.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.3e-07 60.5 181 31.5
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 2.9e-07 59.3 143 33.6
Atru.chr3.1470 Acer truncatum HOM05D009958 ORTHO05D007393 3.8e-07 58.9 153 34.6
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 4.9e-07 58.5 154 31.8
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 4.9e-07 58.5 156 32.1
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 8.4e-07 57.8 164 29.9
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 8.4e-07 57.8 177 29.9
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 1.4e-06 57.0 165 26.7
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.9e-06 56.6 162 30.9
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 3.2e-06 55.8 161 31.7
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 4.2e-06 55.5 180 30.0
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 5.4e-06 55.1 187 31.0
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 7.1e-06 54.7 174 29.9
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 7.1e-06 54.7 175 30.9
DCAR_013184 Daucus carota HOM05D009958 ORTHO05D007393 9.2e-06 54.3 138 31.9
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 9.2e-06 54.3 159 34.0
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 9.2e-06 54.3 155 32.9


User provided reference genes

Program Settings