Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 0.0e+00 2837.0 1450 100.0
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 2.9e-293 1012.7 1482 46.6
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 7.6e-286 988.0 1448 45.4
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 1.1e-284 984.2 1523 44.9
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 3.6e-272 942.6 1432 44.3
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 1.6e-259 900.6 1424 43.2
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 1.5e-246 857.4 1411 41.7
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 2.3e-242 843.6 1485 40.4
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 8.2e-240 835.1 1436 41.0
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 5.1e-234 815.8 1475 39.3
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 4.3e-233 812.8 1446 40.2
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 2.8e-224 783.5 1425 40.3
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 2.5e-220 770.4 1424 38.8
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 3.8e-213 746.5 1436 38.0
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 1.8e-207 727.6 1432 38.0
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 7.0e-207 725.7 1438 37.2
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 3.6e-203 713.4 1442 37.9
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 7.7e-198 695.7 1429 36.6
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 5.6e-196 689.5 1424 36.2
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 4.0e-194 683.3 1433 37.0
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 2.6e-193 680.6 1421 37.2
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.8e-191 674.5 1429 36.7
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 1.0e-189 668.7 1423 36.8
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.3e-188 663.7 1422 37.1
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 1.4e-178 631.7 1428 35.9
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 2.3e-178 630.9 1438 35.4
Gohir.D11G154400 Gossypium hirsutum HOM05D005171 ORTHO05D006343 8.9e-178 629.0 1273 38.0
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 1.3e-176 625.2 1538 34.7
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 4.1e-175 620.2 1459 35.8
Cpa.g.sc136.57 Carica papaya HOM05D005171 ORTHO05D006343 1.3e-173 615.1 1283 37.3
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 6.2e-171 606.3 1441 35.7
GSVIVG01030128001 Vitis vinifera HOM05D005171 ORTHO05D006343 9.2e-167 592.4 1305 34.2
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 2.3e-165 587.8 1430 34.1
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 2.6e-161 574.3 1461 33.1
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 3.4e-161 573.9 1454 33.7
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 9.9e-161 572.4 1454 34.0
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 8.7e-157 559.3 1422 34.7
Dinv05326 Davidia involucrata HOM05D005171 ORTHO05D006343 1.5e-156 558.5 953 39.6
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 5.3e-154 550.1 1431 31.4
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 4.5e-153 547.0 1426 33.2
CSS0016995 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 7.4e-148 529.6 1419 31.8
CSS0020778 Camellia sinensis var. sinensis HOM05D005171 ORTHO05D006343 3.1e-146 524.2 1418 31.7
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 2.7e-142 511.1 1470 32.3
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 3.5e-142 510.8 1462 32.4
Oeu056856.1 Olea europaea HOM05D005171 ORTHO05D006343 6.0e-142 510.0 1452 33.1
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 7.9e-142 509.6 1448 31.2
Gohir.A11G147500 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.6e-139 501.9 1164 35.7
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 7.6e-137 493.0 1420 32.7
Gohir.D08G059000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 1.6e-134 485.3 1052 36.1
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 2.1e-134 485.0 1419 31.6
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 2.1e-131 474.9 1426 31.2
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 2.1e-131 474.9 1419 32.0
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 5.3e-130 470.3 1560 29.5
Gorai.004G060900 Gossypium raimondii HOM05D005171 ORTHO05D006343 9.0e-130 469.5 1042 34.8
MBI14_g37363_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 7.6e-129 466.5 1431 31.9
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 1.7e-128 465.3 1428 32.4
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 1.9e-127 461.8 1444 30.7
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.2e-127 461.1 1419 31.0
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 3.2e-127 461.1 1419 31.0
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 9.3e-127 459.5 1414 29.9
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 9.3e-127 459.5 1414 29.9
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 1.5e-124 452.2 1410 29.6
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 6.3e-123 446.8 1428 30.2
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 4.1e-122 444.1 1413 30.0
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 6.9e-122 443.4 1418 30.5
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 1.5e-121 442.2 1430 30.1
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 4.5e-121 440.7 1444 30.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 2.2e-120 438.3 1428 30.4
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 2.9e-120 438.0 1489 29.4
SGA_v2.0_scaffold181G39698 Striga asiatica HOM05D005171 ORTHO05D006343 5.0e-120 437.2 1473 31.3
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 4.2e-119 434.1 1411 30.1
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 7.9e-118 429.9 1446 30.8
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 1.1e-116 426.0 1447 30.8
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.7e-115 422.2 1436 30.8
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.2e-113 416.0 890 39.4
AUR62037747 Chenopodium quinoa HOM05D005171 ORTHO05D006343 8.5e-112 409.8 1516 29.0
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 3.2e-111 407.9 1422 29.4
PSO541G4744 Papaver somniferum HOM05D005171 ORTHO05D006343 3.6e-110 404.4 1600 28.5
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 2.6e-108 398.3 1466 28.6
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 6.3e-107 393.7 1537 28.0
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 6.3e-107 393.7 1443 28.8
SalBow7G0294 Salvia bowleyana HOM05D005171 ORTHO05D006343 5.3e-106 390.6 1268 29.4
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.2e-100 372.9 1414 29.0
AUR62018228 Chenopodium quinoa HOM05D005171 ORTHO05D006343 6.3e-99 367.1 1514 27.2
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 8.5e-96 356.7 1445 28.3
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 1.1e-95 356.3 1407 27.9
Glyma.20G060900 Glycine max HOM05D005171 ORTHO05D006343 8.0e-94 350.1 473 43.6
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 1.5e-92 345.9 1437 27.4
CiPaw.03G284100 Carya illinoinensis HOM05D005171 ORTHO05D006343 1.2e-89 336.3 507 41.4
TAR627G0484 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.5e-87 329.3 344 51.5
Eucgr.A01375 Eucalyptus grandis HOM05D005171 ORTHO05D006343 5.5e-87 327.4 525 38.3
HanXRQChr09g0257391 Helianthus annuus HOM05D005171 ORTHO05D006343 9.5e-87 326.6 1411 26.6
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 3.4e-84 318.2 1338 26.8
arahy.Tifrunner.gnm1.ann1.DUBF95 Arachis hypogaea HOM05D005171 ORTHO05D006343 4.9e-83 314.3 481 40.1
Gohir.A08G049000 Gossypium hirsutum HOM05D005171 ORTHO05D006343 4.9e-83 314.3 916 31.4
arahy.Tifrunner.gnm1.ann1.DEY0FQ Arachis hypogaea HOM05D005171 ORTHO05D006343 1.2e-76 293.1 482 38.6
ATR0751G269 Amborella trichopoda HOM05D005171 ORTHO05D006343 1.1e-74 286.6 1605 25.2
VMungo0331G1557 Vigna mungo HOM05D005171 ORTHO05D006343 1.4e-74 286.2 537 37.2
CDE01G0402 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 3.2e-74 285.0 1454 26.5
arahy.Tifrunner.gnm1.ann1.CJRH42 Arachis hypogaea HOM05D005171 ORTHO05D006343 7.3e-71 273.9 640 33.0
Aqoxy1G04295 Aquilegia oxysepala HOM05D005171 ORTHO05D006343 1.6e-70 272.7 1407 26.9
PSO017G5154 Papaver somniferum HOM05D005171 ORTHO05D006343 3.6e-70 271.6 1440 26.9
ECA240G4228 Erigeron canadensis HOM05D005171 ORTHO05D006343 1.7e-64 252.7 558 32.4
unitig_37.g12589 Utricularia gibba HOM05D005171 ORTHO05D006343 5.0e-64 251.1 1464 25.5
MBI14_g33664_MAGBIO Magnolia biondii HOM05D005171 ORTHO05D006343 1.1e-63 250.0 271 50.2
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 1.2e-60 240.0 419 36.3
Hma1.2p1_0629F.1_g192130 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 7.5e-60 237.3 279 49.8
HPP92_000125 Vanilla planifolia HOM05D005171 ORTHO05D006343 4.6e-57 228.0 1399 24.5
PSO478G2888 Papaver somniferum HOM05D005171 ORTHO05D006343 4.1e-50 204.9 312 40.1
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 6.0e-49 201.1 259 49.0
Zm00001eb386590 Zea mays HOM05D005171 ORTHO05D006343 4.4e-44 184.9 1417 23.4
Dinv21324 Davidia involucrata HOM05D005171 ORTHO05D006343 7.1e-42 177.6 139 65.5
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.9e-40 171.8 334 40.4
Duzib211G0583 Durio zibethinus HOM05D005171 ORTHO05D006343 4.3e-39 168.3 145 60.0
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 4.3e-39 168.3 363 39.1
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 5.3e-37 161.4 279 41.6
Cpa.g.c43179 Carica papaya HOM05D005171 ORTHO05D006343 1.2e-28 133.7 127 66.9
Cpa.g.sc136.58 Carica papaya HOM05D005171 ORTHO05D006343 1.2e-28 133.7 127 66.9
PSO675G6191 Papaver somniferum HOM05D005171 ORTHO05D006343 7.6e-28 131.0 138 50.0
Os06g0608100 Oryza sativa ssp. japonica HOM05D005171 ORTHO05D006343 3.2e-26 125.6 253 38.3
TPR.G30970 Trifolium pratense HOM05D005171 ORTHO05D006343 6.0e-25 121.3 151 41.7
Gohir.A11G147450 Gossypium hirsutum HOM05D005171 ORTHO05D006343 7.4e-23 114.4 122 59.0
PGSC0003DMG400017412 Solanum tuberosum HOM05D005171 ORTHO05D006343 7.4e-23 114.4 124 48.4
PSO478G0307 Papaver somniferum HOM05D005171 ORTHO05D006343 3.1e-21 109.0 374 31.3
Gohir.D11G154350 Gossypium hirsutum HOM05D005171 ORTHO05D006343 6.5e-19 101.3 117 54.7
MD09G1132400 Malus domestica HOM05D005171 ORTHO05D006343 2.7e-17 95.9 232 35.3
CANSAT11G0838 Cannabis sativa HOM05D005171 ORTHO05D006343 1.3e-16 93.6 91 52.7
SEGI_14020 Sequoiadendron giganteum HOM05D005171 ORTHO05D026698 3.9e-16 92.0 280 32.9
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 6.3e-14 84.7 91 53.8
SEGI_34464 Sequoiadendron giganteum HOM05D005171 ORTHO05D030606 1.8e-13 83.2 144 32.6
Actinidia12355 Actinidia chinensis HOM05D005171 ORTHO05D006343 4.5e-12 78.6 172 40.1
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.9e-11 75.9 154 33.8
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 5.0e-11 75.1 77 51.9
MD09G1132300 Malus domestica HOM05D005171 ORTHO05D006343 1.9e-10 73.2 184 31.5
SEGI_15711 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 1.9e-10 73.2 121 36.4
SEGI_11604 Sequoiadendron giganteum HOM05D005171 ORTHO05D006343 3.6e-09 68.9 103 36.9
Actinidia12354 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.0e-08 67.4 52 65.4
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 3.0e-08 65.9 115 40.9
Glyma.07G011650 Glycine max HOM05D005171 ORTHO05D006343 8.8e-08 64.3 88 35.2
A03p44260 Brassica napus HOM05D005171 ORTHO05D041371 2.0e-07 63.2 84 40.5
BraA03t13556Z Brassica rapa HOM05D005171 ORTHO05D041371 2.0e-07 63.2 84 40.5
ECA240G0272 Erigeron canadensis HOM05D004103 ORTHO05D005242 4.3e-07 62.0 72 51.4
CDE02G3322 Ceratophyllum demersum HOM05D005171 ORTHO05D006343 9.7e-07 60.8 94 42.6


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