Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-98 362.1 200 100.0
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.7e-87 326.2 182 99.5
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 4.1e-81 305.1 174 97.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.1e-81 305.1 174 97.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 8.5e-79 297.4 174 96.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 8.5e-79 297.4 174 96.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-66 255.8 174 78.7
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 2.8e-66 255.8 174 78.7
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 8.3e-50 201.1 175 65.1
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 3.1e-49 199.1 174 68.4
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 5.4e-49 198.4 175 65.7
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 5.7e-43 178.3 172 53.5
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.2e-40 170.6 175 53.7
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 2.0e-40 169.9 173 57.8
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.0e-40 169.9 175 61.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 5.9e-40 168.3 173 57.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 6.6e-39 164.9 174 58.0
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 7.3e-38 161.4 174 55.7
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 4.7e-37 158.7 173 60.1
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.0e-36 155.6 173 49.7
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-36 155.2 82 95.1
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.5e-35 153.7 174 58.0
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 2.6e-35 152.9 174 53.4
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.4e-35 152.5 175 55.4
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.3e-34 150.6 174 54.6
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.7e-34 149.1 176 52.8
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 4.9e-34 148.7 175 47.4
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 8.3e-34 147.9 174 48.3
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 8.3e-34 147.9 173 47.4
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.4e-33 146.4 176 52.8
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.2e-33 146.0 174 48.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 4.1e-33 145.6 171 53.2
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.4e-33 145.2 171 46.8
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 7.0e-33 144.8 173 52.6
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 7.0e-33 144.8 175 54.3
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.2e-32 144.1 174 52.3
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.6e-32 143.7 171 46.2
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.7e-32 142.9 171 46.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 3.5e-32 142.5 174 50.6
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 7.8e-32 141.4 175 49.1
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.0e-31 141.0 174 54.0
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.0e-31 141.0 188 47.3
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 3.9e-31 139.0 174 44.3
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 6.6e-31 138.3 115 60.9
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.9e-30 136.7 115 57.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.9e-30 136.7 174 51.1
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 3.3e-30 136.0 190 44.2
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 4.3e-30 135.6 175 45.1
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 5.6e-30 135.2 176 54.0
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 9.5e-30 134.4 173 48.0
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.2e-29 134.0 172 47.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.6e-29 133.7 174 46.0
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.6e-29 133.7 172 46.5
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 2.1e-29 133.3 172 47.7
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 4.7e-29 132.1 172 47.1
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 6.2e-29 131.7 171 47.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 2.3e-28 129.8 171 49.7
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 3.1e-28 129.4 173 50.3
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 4.0e-28 129.0 189 43.9
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.0e-28 129.0 174 46.0
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 6.8e-28 128.3 174 46.0
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 6.8e-28 128.3 174 41.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.6e-27 126.3 172 48.8
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.4e-27 125.9 172 44.2
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.4e-27 125.6 155 55.5
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 4.4e-27 125.6 175 46.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 4.4e-27 125.6 187 48.1
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.4e-27 125.6 174 47.7
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 5.8e-27 125.2 177 46.3
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 7.5e-27 124.8 172 50.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 8.3e-26 121.3 174 46.6
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 2.4e-25 119.8 173 48.6
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.2e-25 119.4 176 47.7
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 5.4e-25 118.6 175 46.3
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 9.2e-25 117.9 172 46.5
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.7e-24 116.3 172 43.6
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.7e-24 116.3 181 45.3
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.7e-24 116.3 175 39.4
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.0e-24 115.2 170 48.8
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.0e-23 114.4 175 46.9
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 2.3e-23 113.2 174 46.6
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 8.6e-23 111.3 171 41.5
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.1e-22 110.9 173 46.8
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.1e-22 110.9 174 42.0
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.1e-22 110.9 172 43.0
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.5e-22 110.5 174 43.1
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.9e-22 110.2 174 40.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 5.6e-22 108.6 193 42.5
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 5.6e-22 108.6 177 42.9
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 5.6e-22 108.6 179 42.5
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 7.3e-22 108.2 175 42.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 9.5e-22 107.8 175 42.3
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 6.2e-21 105.1 177 42.4
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.1e-20 104.4 170 48.2
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 2.6e-19 99.8 171 38.0
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 7.5e-19 98.2 174 43.1
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 2.9e-18 96.3 174 33.3
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.9e-18 96.3 193 37.3
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 4.1e-17 92.4 175 41.1
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 3.6e-13 79.3 174 40.2
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 9.9e-11 71.2 171 38.0
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 8.4e-10 68.2 171 38.0


User provided reference genes

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