Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 2.3e-82 308.9 160 100.0
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 8.6e-74 280.4 163 89.0
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 9.8e-70 266.9 160 85.0
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 6.0e-67 257.7 160 82.5
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.3e-66 256.5 160 80.6
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 3.9e-66 255.0 159 82.4
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.9e-65 252.7 160 81.9
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 1.9e-65 252.7 160 77.5
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 1.2e-64 250.0 160 78.1
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.6e-64 249.6 163 76.1
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 6.2e-64 247.7 160 79.4
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 4.0e-63 245.0 162 75.3
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 4.0e-63 245.0 166 74.7
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 6.8e-63 244.2 160 76.9
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 8.9e-63 243.8 164 75.0
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 2.6e-62 242.3 161 76.4
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 2.6e-62 242.3 165 72.7
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 5.8e-62 241.1 163 75.5
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 5.8e-62 241.1 163 75.5
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 5.8e-62 241.1 164 72.6
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 7.5e-62 240.7 163 75.5
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 7.5e-62 240.7 164 73.2
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 9.8e-62 240.4 157 75.2
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 1.3e-61 240.0 161 75.2
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.9e-61 238.0 160 75.0
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 4.9e-61 238.0 160 75.0
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 4.9e-61 238.0 160 72.5
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.1e-60 236.9 159 76.7
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.1e-60 236.9 163 74.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 1.4e-60 236.5 164 75.0
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.4e-60 235.7 164 74.4
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 3.2e-60 235.3 163 74.8
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.1e-60 235.0 161 75.8
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 9.2e-60 233.8 157 73.2
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 1.2e-59 233.4 167 73.1
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.2e-59 233.4 157 75.8
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.7e-59 232.3 160 71.9
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.5e-59 231.9 163 74.2
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.6e-59 231.5 166 71.7
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 4.6e-59 231.5 162 71.6
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 6.0e-59 231.1 160 73.8
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 6.0e-59 231.1 162 72.8
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 1.0e-58 230.3 162 71.0
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 1.3e-58 229.9 160 72.5
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 1.7e-58 229.6 164 72.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.0e-58 228.8 160 72.5
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 3.9e-58 228.4 164 68.3
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 5.1e-58 228.0 157 72.0
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.1e-58 228.0 165 71.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 5.1e-58 228.0 165 71.5
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 5.1e-58 228.0 160 72.5
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.6e-58 227.6 155 74.2
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.6e-58 227.6 157 73.9
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 6.6e-58 227.6 157 73.9
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 8.6e-58 227.3 165 72.7
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 1.1e-57 226.9 160 71.9
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 1.5e-57 226.5 160 71.9
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.9e-57 226.1 163 72.4
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.9e-57 226.1 157 73.2
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 5.6e-57 224.6 160 68.8
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 7.3e-57 224.2 166 67.5
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 9.5e-57 223.8 163 72.4
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.2e-56 223.4 161 69.6
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.2e-56 223.4 161 69.6
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.2e-56 223.4 164 73.2
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.2e-56 223.4 167 67.7
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 3.6e-56 221.9 153 73.2
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 3.6e-56 221.9 153 73.2
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 3.6e-56 221.9 161 70.2
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 3.6e-56 221.9 162 69.1
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.6e-56 221.9 154 70.8
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.7e-56 221.5 155 72.3
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 4.7e-56 221.5 167 65.9
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 6.2e-56 221.1 157 70.1
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 6.2e-56 221.1 166 68.1
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 1.4e-55 219.9 155 72.3
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.4e-55 219.9 166 71.1
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 1.4e-55 219.9 162 69.1
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 1.8e-55 219.5 163 65.6
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.8e-55 219.5 159 70.4
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.1e-55 218.8 154 72.1
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.1e-55 218.8 154 71.4
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 8.9e-55 217.2 165 66.1
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 1.5e-54 216.5 160 68.8
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 2.0e-54 216.1 160 68.8
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 2.6e-54 215.7 167 67.1
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 4.4e-54 214.9 163 67.5
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 5.8e-54 214.5 160 67.5
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 7.5e-54 214.2 164 66.5
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-53 213.4 157 68.2
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 1.7e-53 213.0 160 65.0
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 2.2e-53 212.6 158 68.4
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 2.9e-53 212.2 162 69.1
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 3.7e-53 211.8 158 67.7
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 3.7e-53 211.8 159 68.6
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 3.7e-53 211.8 144 76.4
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 4.9e-53 211.5 162 64.8
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 4.9e-53 211.5 162 69.1
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 4.9e-53 211.5 162 69.1
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 3.5e-51 205.3 165 66.1
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 7.8e-51 204.1 147 70.7
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 7.8e-51 204.1 157 64.3
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 2.3e-50 202.6 144 73.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.0e-50 202.2 160 65.6
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 5.1e-50 201.4 160 66.9
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.6e-48 196.4 151 66.9
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 6.2e-48 194.5 119 77.3
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 3.1e-47 192.2 118 71.2
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 3.9e-42 175.3 151 60.9
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.1e-39 165.6 152 57.9
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-35 153.7 157 51.0
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 4.3e-33 145.2 158 48.1
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.0e-31 138.7 84 81.0
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 1.3e-29 133.7 77 77.9
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 4.2e-28 128.6 103 67.0
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.9e-25 119.8 150 44.0
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 1.6e-24 116.7 90 64.4
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-23 114.0 90 63.3
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 4.3e-17 92.0 171 43.3
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.8e-15 86.7 72 63.9
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 4.5e-14 82.0 125 36.8
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 1.3e-13 80.5 49 73.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 2.9e-13 79.3 49 75.5
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 8.4e-13 77.8 121 37.2
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 7.4e-09 64.7 131 32.1


User provided reference genes

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