Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G059000 Manihot esculenta HOM05D005211 ORTHO05D006148 3.4e-71 271.6 138 100.0
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 1.1e-37 160.2 123 72.4
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 7.5e-26 120.9 134 52.2
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 2.2e-25 119.4 143 51.0
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.1e-24 117.1 123 56.1
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 1.8e-24 116.3 138 54.3
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.4e-24 115.9 119 55.5
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 3.2e-24 115.5 119 55.5
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.2e-24 114.0 119 56.3
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 3.5e-23 112.1 119 54.6
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 3.5e-23 112.1 121 53.7
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.0e-22 110.5 139 50.4
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-22 110.2 138 47.8
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.7e-22 109.8 121 52.9
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 2.3e-22 109.4 171 45.6
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 2.3e-22 109.4 119 51.3
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 2.9e-22 109.0 119 52.1
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 3.9e-22 108.6 138 47.1
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 5.0e-22 108.2 138 47.1
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 8.6e-22 107.5 119 53.8
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 8.6e-22 107.5 116 56.9
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.5e-21 106.7 131 51.1
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 2.5e-21 105.9 119 48.7
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 5.6e-21 104.8 168 45.2
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 7.3e-21 104.4 121 54.5
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.2e-20 103.6 146 50.7
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 1.2e-20 103.6 146 50.7
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 1.2e-20 103.6 130 46.9
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.1e-20 102.8 121 48.8
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 2.1e-20 102.8 117 51.3
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 2.8e-20 102.4 141 49.6
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.8e-20 102.4 138 46.4
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 6.1e-20 101.3 138 45.7
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 6.1e-20 101.3 119 54.6
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 1.0e-19 100.5 134 44.8
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 1.4e-19 100.1 131 51.1
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 4.0e-19 98.6 120 50.8
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 4.0e-19 98.6 142 45.1
CiPaw.02G059600 Carya illinoinensis HOM05D005211 ORTHO05D006148 5.2e-19 98.2 120 50.8
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 6.8e-19 97.8 122 46.7
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 6.8e-19 97.8 146 45.2
MD10G1151600 Malus domestica HOM05D005211 ORTHO05D006148 8.9e-19 97.4 124 48.4
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.5e-18 96.7 119 48.7
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.5e-18 96.7 134 47.0
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 2.0e-18 96.3 120 50.0
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.6e-18 95.9 120 47.5
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 2.6e-18 95.9 125 45.6
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 3.4e-18 95.5 133 42.9
PSO675G5714 Papaver somniferum HOM05D005211 ORTHO05D006148 4.4e-18 95.1 138 42.8
FAN24G0649 Fragaria x ananassa HOM05D005211 ORTHO05D006148 5.8e-18 94.7 124 47.6
FAN27G2625 Fragaria x ananassa HOM05D005211 ORTHO05D006148 7.5e-18 94.4 123 47.2
Ciclev10016996m.g Citrus clementina HOM05D005211 ORTHO05D006148 9.8e-18 94.0 129 47.3
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.3e-17 93.6 121 46.3
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.7e-17 93.2 135 44.4
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 2.2e-17 92.8 138 47.8
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.9e-17 92.4 119 47.9
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.9e-17 92.4 119 47.9
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 2.9e-17 92.4 142 40.1
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.7e-17 92.0 124 46.0
Haze_11077 Corylus avellana HOM05D005211 ORTHO05D006148 4.9e-17 91.7 140 42.9
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.9e-17 91.7 134 45.5
Hma1.2p1_0412F.1_g147140 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 6.4e-17 91.3 129 45.7
RcHm_v2.0_Chr6g0282791 Rosa chinensis HOM05D005211 ORTHO05D006148 6.4e-17 91.3 141 44.0
CANSAT78G0009 Cannabis sativa HOM05D005211 ORTHO05D006148 8.3e-17 90.9 119 45.4
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 8.3e-17 90.9 122 46.7
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-16 90.1 134 44.8
Gohir.D07G167400 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.4e-16 89.4 110 50.0
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 3.2e-16 89.0 107 50.5
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 3.2e-16 89.0 120 46.7
Hma1.2p1_0959F.1_g241620 Hydrangea macrophylla HOM05D005211 ORTHO05D006148 4.1e-16 88.6 121 44.6
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 7.0e-16 87.8 132 45.5
FAN22G0040 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.2e-16 87.4 116 47.4
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 1.2e-15 87.0 119 50.4
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 1.6e-15 86.7 138 42.0
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 3.5e-15 85.5 119 46.2
Sed0015684 Sechium edule HOM05D005211 ORTHO05D006148 4.6e-15 85.1 119 42.0
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 6.0e-15 84.7 110 50.9
PGR142G0694 Punica granatum HOM05D005211 ORTHO05D006148 7.8e-15 84.3 142 42.3
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 1.0e-14 84.0 132 36.4
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.3e-14 83.6 119 45.4
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.3e-14 82.8 109 46.8
ECA247G2119 Erigeron canadensis HOM05D005211 ORTHO05D006148 2.3e-14 82.8 115 46.1
CANSAT01G0934 Cannabis sativa HOM05D005211 ORTHO05D006148 3.9e-14 82.0 125 41.6
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 5.0e-14 81.6 125 48.0
FvH4_2g17760 Fragaria vesca HOM05D005211 ORTHO05D006148 6.6e-14 81.3 112 46.4
Oeu049588.1 Olea europaea HOM05D005211 ORTHO05D006148 1.1e-13 80.5 114 45.6
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.5e-13 80.1 129 45.0
Lsat_1_v5_gn_5_178301 Lactuca sativa HOM05D005211 ORTHO05D006148 1.5e-13 80.1 130 41.5
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.9e-13 79.7 118 45.8
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 2.5e-13 79.3 127 46.5
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 2.5e-13 79.3 129 41.1
Oeu013415.1 Olea europaea HOM05D005211 ORTHO05D006148 2.5e-13 79.3 123 43.9
Actinidia30014 Actinidia chinensis HOM05D005211 ORTHO05D006148 5.6e-13 78.2 105 47.6
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 5.6e-13 78.2 131 44.3
ClCG08G003780 Citrullus lanatus HOM05D005211 ORTHO05D006148 9.5e-13 77.4 118 40.7
Migut.D00738 Erythranthe guttata HOM05D005211 ORTHO05D006148 9.5e-13 77.4 129 39.5
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.6e-12 76.6 119 45.4
Peaxi162Scf00335g00067 Petunia axillaris HOM05D005211 ORTHO05D006148 1.6e-12 76.6 100 45.0
ATR0686G247 Amborella trichopoda HOM05D005211 ORTHO05D006148 2.1e-12 76.3 138 41.3
Atru.chr6.3543 Acer truncatum HOM05D005211 ORTHO05D006148 3.6e-12 75.5 46 71.7
CsaV3_6G003020 Cucumis sativus L. HOM05D005211 ORTHO05D006148 3.6e-12 75.5 119 42.0
TWI63G1319 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 3.6e-12 75.5 119 42.0
CSS0032639 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 4.7e-12 75.1 97 46.4
unitig_0.g414 Utricularia gibba HOM05D005211 ORTHO05D006148 6.2e-12 74.7 128 39.1
Nitab4.5_0004516g0010 Nicotiana tabacum HOM05D005211 ORTHO05D006148 1.1e-11 73.9 101 44.6
Dinv10443 Davidia involucrata HOM05D005211 ORTHO05D006148 1.4e-11 73.6 117 41.9
FAN15G2376 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.3e-11 72.8 104 45.2
Sopen09g012960 Solanum pennellii HOM05D005211 ORTHO05D006148 4.0e-11 72.0 119 40.3
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.2e-10 70.5 116 44.0
SGA_v2.0_scaffold77G25295 Striga asiatica HOM05D005211 ORTHO05D006148 1.5e-10 70.1 134 38.1
THA.LOC104802290 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 2.0e-10 69.7 125 36.0
THA.LOC104803428 Tarenaya hassleriana HOM05D005211 ORTHO05D006148 3.4e-10 68.9 129 37.2
AT2G43060 Arabidopsis thaliana HOM05D005211 ORTHO05D006148 4.4e-10 68.6 121 38.8
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 4.4e-10 68.6 132 37.9
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 9.8e-10 67.4 121 37.2
HanXRQChr01g0007251 Helianthus annuus HOM05D005211 ORTHO05D006148 1.7e-09 66.6 141 39.0
BcaNung03535 Brassica carinata HOM05D005211 ORTHO05D006148 3.7e-09 65.5 140 35.7
AL4G41710 Arabidopsis lyrata HOM05D005211 ORTHO05D006148 4.9e-09 65.1 136 36.8
BNapus_Darmor_BZH_scaffold_64p00090 Brassica napus HOM05D005211 ORTHO05D006148 1.1e-08 63.9 129 34.9
BraA04t18707Z Brassica rapa HOM05D005211 ORTHO05D006148 1.1e-08 63.9 129 34.9
Carub.0004s2554 Capsella rubella HOM05D005211 ORTHO05D006148 1.1e-08 63.9 140 34.3
CARHR138130 Cardamine hirsuta HOM05D005211 ORTHO05D006148 1.9e-08 63.2 125 34.4
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 1.9e-08 63.2 117 41.9
BcaB06g29284 Brassica carinata HOM05D005211 ORTHO05D006148 7.1e-08 61.2 126 38.1
BcaB06g29285 Brassica carinata HOM05D005211 ORTHO05D006148 7.1e-08 61.2 126 38.1
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 7.1e-08 61.2 125 40.8
Sp4g25190 Schrenkiella parvula HOM05D005211 ORTHO05D006148 1.6e-07 60.1 132 35.6
unitig_52.g17443 Utricularia gibba HOM05D005211 ORTHO05D006148 1.6e-07 60.1 113 34.5
Thhalv10017615m.g Eutrema salsugineum HOM05D005211 ORTHO05D006148 2.7e-07 59.3 135 34.8
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 6.0e-07 58.2 131 34.4
C04p70060 Brassica napus HOM05D005211 ORTHO05D006148 1.7e-06 56.6 46 54.3
BolC4t28506H Brassica oleracea HOM05D005211 ORTHO05D006148 1.7e-06 56.6 46 54.3
HPP92_023344 Vanilla planifolia HOM05D005211 ORTHO05D006148 1.7e-06 56.6 125 40.0
BcaC02g12418 Brassica carinata HOM05D005211 ORTHO05D006148 3.9e-06 55.5 140 30.7
BolC4t22051H Brassica oleracea HOM05D005211 ORTHO05D006148 3.9e-06 55.5 140 30.7
Os04g0660100 Oryza sativa ssp. japonica HOM05D005211 ORTHO05D006148 3.9e-06 55.5 154 31.2
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 5.1e-06 55.1 143 26.6
C04p04120 Brassica napus HOM05D005211 ORTHO05D006148 6.6e-06 54.7 121 33.9
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 8.6e-06 54.3 90 38.9
A05p03550 Brassica napus HOM05D005211 ORTHO05D006148 8.6e-06 54.3 140 32.9
BraA05t19341Z Brassica rapa HOM05D005211 ORTHO05D006148 8.6e-06 54.3 140 32.9


User provided reference genes

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