Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 5.2e-254 880.6 441 100.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 9.1e-251 869.8 442 99.1
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.0e-233 813.1 495 85.9
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.7e-233 812.4 495 85.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-230 800.4 495 84.6
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 6.8e-230 800.4 495 84.6
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 8.5e-148 527.7 494 57.3
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 1.4e-147 526.9 498 57.6
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 3.2e-147 525.8 494 57.1
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.7e-146 522.7 494 57.9
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 5.2e-145 518.5 496 56.0
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 5.7e-144 515.0 494 55.5
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.3e-143 513.8 496 56.7
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.7e-143 513.5 494 55.9
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 2.0e-141 506.5 492 56.9
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.8e-140 502.3 494 55.9
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.0e-138 494.6 494 54.5
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 1.8e-137 493.4 494 54.3
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-137 493.4 245 100.0
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.2e-136 490.7 498 54.4
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 5.7e-136 488.4 495 53.7
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 2.2e-135 486.5 496 55.2
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 5.0e-132 475.3 431 56.6
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 6.5e-132 474.9 474 54.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.6e-130 470.3 494 52.4
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.2e-129 465.3 465 52.0
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.2e-128 464.2 498 50.8
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.6e-128 463.0 495 51.3
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 4.4e-128 462.2 483 52.8
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.3e-127 460.7 495 50.7
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.3e-127 460.7 489 51.7
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.7e-127 460.3 490 50.4
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.2e-127 459.9 498 50.6
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 3.7e-127 459.1 485 51.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 3.7e-127 459.1 488 50.8
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.4e-126 457.2 499 50.1
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.4e-126 457.2 497 50.1
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.8e-126 456.8 485 51.3
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 2.0e-125 453.4 487 50.7
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 4.5e-125 452.2 495 49.9
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.1e-123 447.6 491 50.1
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.9e-123 446.8 496 49.2
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 9.5e-123 444.5 487 49.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 2.8e-122 443.0 496 49.6
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.0e-121 441.0 487 49.1
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 5.2e-121 438.7 501 48.5
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 1.2e-120 437.6 495 49.1
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 2.2e-119 433.3 495 47.7
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.8e-119 433.0 490 46.9
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.9e-119 432.2 493 47.5
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.1e-118 431.0 514 47.1
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 9.2e-118 427.9 490 48.8
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 2.0e-117 426.8 494 47.8
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.0e-117 426.8 493 47.3
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.7e-117 426.4 470 48.5
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 4.5e-117 425.6 490 49.4
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 4.5e-117 425.6 492 47.0
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 7.8e-117 424.9 471 48.2
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 2.3e-116 423.3 501 46.7
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.9e-116 422.5 487 47.6
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 7.3e-115 418.3 487 47.4
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 1.6e-114 417.2 496 47.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.1e-114 416.8 486 48.8
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.1e-114 416.8 494 46.4
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 2.8e-114 416.4 500 47.2
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.6e-114 416.0 495 47.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 6.1e-114 415.2 494 47.0
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 6.1e-114 415.2 491 46.6
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 6.8e-113 411.8 498 46.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.6e-112 409.8 494 44.7
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 4.4e-112 409.1 495 46.1
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 3.7e-111 406.0 499 46.3
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 8.3e-111 404.8 496 46.2
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 8.3e-111 404.8 496 45.8
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.1e-110 404.4 488 46.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.4e-110 404.1 490 46.1
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 2.4e-110 403.3 496 46.4
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 2.4e-110 403.3 498 45.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 3.2e-110 402.9 496 46.0
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 4.3e-107 392.5 489 45.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 6.2e-106 388.7 495 44.8
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 8.0e-106 388.3 489 45.2
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 8.0e-106 388.3 493 44.8
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.3e-105 386.7 498 44.8
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.0e-105 386.0 490 43.3
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.0e-104 383.6 494 44.7
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.9e-103 379.8 487 44.8
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 8.3e-103 378.3 490 43.9
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 9.2e-102 374.8 490 45.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 3.5e-101 372.9 493 43.0
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 5.6e-99 365.5 497 45.1
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.3e-99 365.2 370 54.6
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 1.2e-98 364.4 501 44.5
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 9.9e-96 354.8 491 42.6
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.7e-92 344.0 347 51.6
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.5e-91 340.9 492 41.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.7e-87 327.4 198 82.8
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.7e-87 327.4 198 82.8
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.1e-86 324.7 377 45.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 3.6e-82 309.7 494 37.4
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 5.3e-81 305.8 326 51.5
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.2e-80 304.7 338 49.7
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.2e-79 300.4 390 44.6
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 4.2e-78 296.2 496 37.3
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 3.5e-69 266.5 323 45.5
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 4.8e-66 256.1 174 79.3
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-65 255.0 174 78.7
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.0e-52 211.8 222 55.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.2e-50 204.1 434 29.7
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.7e-45 187.2 502 28.7
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 7.4e-43 179.1 395 29.1
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.4e-41 174.9 160 53.1
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 9.7e-35 152.1 423 28.8
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 2.6e-27 127.5 118 54.2
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 3.8e-23 113.6 379 26.6
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 6.5e-23 112.8 131 47.3
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.5e-22 109.8 131 46.6
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 9.4e-22 109.0 118 48.3
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.6e-21 108.2 171 35.7
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 5.2e-20 103.2 118 44.9
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.0e-19 101.3 123 44.7
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.5e-16 90.5 118 48.3
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 4.5e-08 63.5 224 24.6


User provided reference genes

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