Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 5.6e-115 417.5 199 100.0
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 5.6e-115 417.5 199 100.0
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.4e-112 407.9 198 97.5
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.1e-110 403.3 198 96.5
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-108 395.6 198 96.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-108 395.6 198 96.0
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 9.9e-96 353.6 175 96.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-89 332.8 198 82.8
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 4.5e-88 328.2 198 82.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 7.4e-83 310.8 198 73.2
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.5e-80 303.1 198 72.7
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.6e-80 302.4 197 72.6
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 4.5e-80 301.6 198 72.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 5.8e-80 301.2 198 73.2
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 3.8e-79 298.5 198 71.7
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 4.9e-79 298.1 198 71.2
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 6.5e-79 297.7 198 72.2
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 7.1e-78 294.3 198 69.2
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.0e-76 290.4 197 69.0
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.3e-76 290.0 197 70.1
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 1.3e-76 290.0 198 69.2
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 2.3e-76 289.3 198 67.2
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 6.7e-76 287.7 199 67.8
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 6.7e-76 287.7 198 66.7
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 1.1e-75 287.0 198 67.2
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.1e-75 287.0 198 66.7
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.5e-75 285.8 198 69.7
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.7e-75 284.6 192 68.8
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 5.7e-75 284.6 190 68.9
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 7.4e-75 284.3 198 67.7
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 9.6e-75 283.9 198 66.7
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.6e-74 283.1 198 65.2
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.1e-74 282.7 198 67.2
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 3.7e-74 282.0 197 66.5
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.1e-73 280.4 185 73.0
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.4e-73 280.0 198 64.6
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 1.8e-73 279.6 198 67.2
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 4.1e-73 278.5 198 64.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 6.9e-73 277.7 198 65.2
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 6.9e-73 277.7 198 65.2
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 2.0e-72 276.2 198 65.2
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.6e-72 275.8 197 62.9
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 3.4e-72 275.4 198 68.2
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 4.5e-72 275.0 198 64.6
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 7.6e-72 274.2 197 62.9
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 2.2e-71 272.7 198 63.6
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 6.5e-71 271.2 199 64.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 6.5e-71 271.2 197 62.4
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 8.5e-71 270.8 197 67.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 1.9e-70 269.6 198 63.6
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 3.2e-70 268.9 198 63.6
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 4.2e-70 268.5 197 61.9
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 7.2e-70 267.7 198 63.6
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 9.3e-70 267.3 198 63.6
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.6e-69 266.5 199 63.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.6e-69 266.5 198 63.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 2.1e-69 266.2 198 66.7
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.7e-69 265.8 192 62.5
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 2.7e-69 265.8 198 61.6
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 3.6e-69 265.4 198 61.1
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 4.6e-69 265.0 197 61.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 7.9e-69 264.2 200 63.5
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.8e-68 263.1 196 62.2
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 3.9e-68 261.9 196 61.2
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 5.1e-68 261.5 200 63.0
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 5.1e-68 261.5 196 62.2
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 6.7e-68 261.2 200 63.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 8.7e-68 260.8 196 61.2
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.5e-67 260.0 199 62.8
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.3e-67 258.5 200 62.5
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 9.7e-67 257.3 190 63.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.3e-66 256.9 196 59.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.1e-65 253.8 180 65.6
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.8e-65 253.1 198 62.1
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.4e-65 252.7 198 60.1
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 3.1e-65 252.3 197 62.9
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 4.1e-65 251.9 197 62.4
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 9.1e-65 250.8 198 59.1
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.5e-64 250.0 179 64.8
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-64 250.0 198 59.1
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.4e-64 248.8 179 64.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 7.7e-64 247.7 198 62.1
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.3e-63 246.9 198 61.6
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.7e-63 246.5 181 63.0
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 2.9e-63 245.7 173 64.7
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 6.5e-63 244.6 197 56.3
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.1e-62 243.8 198 61.6
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 5.5e-62 241.5 209 57.9
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 7.2e-62 241.1 197 60.4
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.0e-60 237.3 206 53.9
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.0e-60 237.3 198 59.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 1.4e-60 236.9 190 58.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 8.8e-60 234.2 198 54.5
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-59 233.8 164 65.9
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.1e-59 233.8 164 65.9
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 5.7e-59 231.5 164 65.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 6.3e-58 228.0 164 64.6
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.8e-57 226.5 164 64.0
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.1e-57 225.7 181 60.8
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 2.6e-51 206.1 164 54.9
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.0e-47 194.1 128 65.6
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 3.8e-47 192.2 102 82.4
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.3e-44 183.0 128 67.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.5e-43 180.3 117 70.1
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 8.2e-42 174.5 112 69.6
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 2.4e-41 172.9 169 45.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 3.1e-41 172.6 157 49.0
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.7e-40 169.5 159 46.5
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 6.5e-39 164.9 128 60.9
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 5.5e-38 161.8 187 43.3
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.3e-34 150.6 119 58.8
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 2.9e-31 139.4 186 37.1
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 8.0e-13 78.2 186 29.0
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.0e-07 61.2 79 41.8


User provided reference genes

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