Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 5.2e-215 750.7 370 100.0
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.8e-138 496.5 371 67.9
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 3.0e-138 495.7 378 69.8
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 1.8e-135 486.5 376 67.0
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 5.0e-133 478.4 374 67.1
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.4e-132 476.9 372 65.6
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 6.1e-131 471.5 372 65.6
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.3e-130 469.5 372 65.3
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 2.3e-130 469.5 370 64.6
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 3.0e-130 469.2 372 64.5
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 9.7e-129 464.2 352 67.6
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.3e-128 463.8 378 64.6
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.0e-126 456.4 371 65.2
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 5.5e-124 448.4 407 59.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 3.6e-123 445.7 374 65.2
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 1.1e-121 440.7 377 63.1
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 5.7e-121 438.3 412 59.2
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 5.7e-121 438.3 346 65.3
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 3.1e-119 432.6 370 61.6
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 5.3e-119 431.8 380 60.0
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 4.5e-118 428.7 370 61.6
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 4.5e-118 428.7 370 60.0
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 1.7e-117 426.8 448 54.7
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 1.7e-117 426.8 401 58.6
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 2.2e-117 426.4 374 60.7
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 3.8e-117 425.6 399 58.4
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 1.1e-116 424.1 374 60.4
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.9e-116 423.3 390 57.4
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 2.5e-116 422.9 373 58.4
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 4.2e-116 422.2 304 70.4
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 4.2e-116 422.2 391 58.3
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 4.2e-116 422.2 386 61.7
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 7.2e-116 421.4 373 60.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.2e-115 420.6 379 60.4
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.6e-115 420.2 373 61.7
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 2.1e-115 419.9 256 77.0
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 3.6e-115 419.1 372 59.7
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 2.3e-114 416.4 279 72.8
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 3.9e-114 415.6 356 60.4
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 6.7e-114 414.8 456 52.2
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 6.7e-114 414.8 372 61.0
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.5e-113 413.7 375 58.7
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.0e-113 413.3 373 60.6
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.7e-112 410.2 372 58.3
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 2.2e-112 409.8 409 54.8
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 3.7e-112 409.1 373 60.9
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 1.6e-110 403.7 371 59.3
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.6e-110 402.9 373 59.0
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 4.5e-110 402.1 283 67.5
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 2.9e-109 399.4 422 54.0
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 5.0e-109 398.7 382 57.9
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 5.0e-109 398.7 372 59.1
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 1.9e-108 396.7 373 58.2
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 5.5e-108 395.2 284 67.6
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 1.2e-107 394.0 358 60.1
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 1.6e-107 393.7 378 57.4
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 2.7e-107 392.9 447 50.6
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.8e-106 390.2 256 71.1
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 1.7e-104 383.6 265 69.4
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 3.7e-104 382.5 389 56.0
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 4.8e-104 382.1 266 68.0
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 5.4e-103 378.6 279 64.5
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 7.0e-103 378.3 304 62.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 1.2e-102 377.5 352 54.3
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 2.7e-102 376.3 369 55.6
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 4.5e-102 375.6 393 53.2
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 5.9e-102 375.2 367 52.6
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 1.0e-101 374.4 372 53.5
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.0e-101 374.4 393 53.2
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 1.0e-101 374.4 342 55.6
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.0e-101 374.4 371 55.3
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.3e-101 374.0 401 51.9
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.3e-101 374.0 401 51.9
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.2e-100 369.4 406 51.5
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 1.4e-98 364.0 382 53.1
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 5.2e-98 362.1 373 51.7
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 4.4e-97 359.0 399 52.9
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 3.7e-96 355.9 387 52.7
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.3e-92 342.8 383 47.5
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.2e-91 340.9 287 63.1
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 2.0e-86 323.6 370 49.2
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 1.6e-83 313.9 389 45.0
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 1.6e-83 313.9 288 56.2
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 1.5e-81 307.4 311 55.9
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 2.9e-80 303.1 425 46.1
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 3.5e-78 296.2 386 47.7
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.3e-77 293.5 172 80.8
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 8.6e-77 291.6 294 55.4
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 5.6e-76 288.9 344 51.5
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 1.1e-74 284.6 288 51.0
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 9.8e-73 278.1 264 55.7
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 6.4e-72 275.4 277 57.4
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 5.4e-71 272.3 182 73.6
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 9.5e-68 261.5 384 44.5
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 4.6e-62 242.7 283 49.8
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 1.2e-57 228.0 231 48.9
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 1.3e-56 224.6 362 43.1
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 2.2e-56 223.8 214 54.2
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.7e-53 214.2 151 64.9
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 8.1e-51 205.3 326 40.2
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 4.9e-48 196.1 113 81.4
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 6.4e-48 195.7 178 60.1
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 5.4e-47 192.6 256 41.8
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.4e-39 167.2 91 86.8
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 5.1e-37 159.5 231 45.9
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 2.4e-34 150.6 123 62.6
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 2.9e-32 143.7 87 72.4
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 9.3e-31 138.7 84 75.0
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 1.6e-30 137.9 214 40.7
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 4.6e-30 136.3 281 33.1
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 2.3e-29 134.0 233 41.2
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 2.0e-25 120.9 134 45.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.5e-20 104.8 84 53.6
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 2.2e-19 100.9 142 44.4
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 2.1e-14 84.3 59 67.8
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.8e-13 81.3 47 76.6
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.0e-08 65.5 130 38.5
Os06g0471100 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.9e-08 63.9 184 32.1


User provided reference genes

Program Settings