Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 6.3e-120 434.1 218 100.0
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.7e-88 329.7 202 85.6
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 2.4e-79 299.3 219 75.3
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 5.4e-79 298.1 218 75.7
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 7.1e-79 297.7 219 73.1
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 1.0e-77 293.9 217 75.1
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 1.5e-76 290.0 219 73.5
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.3e-76 288.5 219 71.7
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.3e-76 288.5 219 71.7
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 5.6e-76 288.1 218 74.8
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 1.2e-75 287.0 227 71.8
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.6e-75 286.6 218 74.3
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 1.1e-74 283.9 218 72.9
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.1e-74 283.9 218 72.5
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.8e-74 283.1 218 72.0
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 4.0e-74 282.0 225 70.2
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 5.2e-74 281.6 225 69.8
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 1.5e-73 280.0 218 70.6
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.0e-73 279.6 219 72.1
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 4.4e-73 278.5 216 70.4
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 2.2e-72 276.2 218 71.1
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.2e-72 276.2 225 69.3
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 3.8e-72 275.4 218 72.0
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 1.9e-71 273.1 218 69.3
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 2.4e-71 272.7 220 71.8
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 3.2e-71 272.3 227 68.7
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 1.2e-70 270.4 228 66.2
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 1.6e-70 270.0 219 68.9
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.6e-70 270.0 221 69.2
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.1e-70 269.6 225 68.0
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.0e-69 267.3 225 66.2
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 1.3e-69 266.9 220 69.1
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 2.3e-69 266.2 258 59.7
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 3.0e-69 265.8 225 67.6
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 5.1e-69 265.0 222 67.6
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 6.6e-69 264.6 222 68.0
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 6.6e-69 264.6 223 67.7
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 8.7e-69 264.2 202 74.3
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 8.7e-69 264.2 218 68.3
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.1e-68 263.8 223 66.4
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 1.1e-68 263.8 218 67.9
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.9e-68 263.1 269 58.7
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 3.3e-68 262.3 220 66.8
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 5.6e-68 261.5 223 67.3
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 1.6e-67 260.0 223 65.9
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 1.6e-67 260.0 222 68.0
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 2.8e-67 259.2 220 65.5
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.6e-67 258.8 218 66.5
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 3.6e-67 258.8 220 65.5
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 4.8e-67 258.5 226 65.0
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 8.1e-67 257.7 168 81.0
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 1.1e-66 257.3 232 65.5
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 1.4e-66 256.9 219 65.8
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 1.4e-66 256.9 223 65.5
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 2.4e-66 256.1 219 68.0
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 2.4e-66 256.1 219 68.0
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 3.1e-66 255.8 218 64.2
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 5.3e-66 255.0 217 65.9
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 6.9e-66 254.6 286 53.1
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 2.6e-65 252.7 218 66.1
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 3.4e-65 252.3 219 66.7
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 5.8e-65 251.5 223 63.7
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 1.3e-64 250.4 240 61.2
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 4.9e-64 248.4 166 78.9
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 4.9e-64 248.4 218 62.8
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.1e-63 247.3 166 81.3
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 1.1e-63 247.3 208 64.9
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.4e-63 246.1 241 60.6
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 2.4e-63 246.1 168 78.0
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.2e-63 245.7 224 63.4
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 9.3e-63 244.2 224 62.9
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 1.2e-62 243.8 219 63.0
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 3.5e-62 242.3 207 68.6
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 6.0e-62 241.5 218 62.4
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 1.0e-61 240.7 223 63.2
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 1.0e-61 240.7 221 61.5
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 5.1e-61 238.4 220 63.6
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 8.7e-61 237.7 194 69.6
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 1.1e-60 237.3 221 63.3
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.5e-60 236.9 249 58.6
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 1.9e-60 236.5 224 62.9
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 1.9e-60 236.5 219 62.6
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 2.5e-60 236.1 223 62.3
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 2.5e-60 236.1 154 83.8
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 9.6e-60 234.2 221 61.1
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 1.3e-59 233.8 223 61.9
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 1.6e-59 233.4 222 62.2
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 2.1e-59 233.0 221 62.4
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 2.1e-59 233.0 215 64.2
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 2.8e-59 232.6 218 61.9
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 3.6e-59 232.3 223 61.4
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 3.6e-59 232.3 223 61.4
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 3.6e-59 232.3 223 61.4
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 4.8e-59 231.9 221 62.0
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 8.1e-59 231.1 130 90.0
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 4.0e-58 228.8 224 61.2
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 6.9e-58 228.0 200 64.5
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 6.9e-58 228.0 294 49.7
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 9.0e-58 227.6 223 61.9
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 1.2e-57 227.3 221 61.1
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 1.5e-57 226.9 208 63.5
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 2.0e-57 226.5 209 60.3
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 4.5e-57 225.3 199 63.3
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 9.9e-57 224.2 197 66.0
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 9.9e-57 224.2 211 62.1
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 8.4e-56 221.1 219 61.2
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 5.5e-55 218.4 200 61.0
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 3.5e-54 215.7 160 71.9
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 6.7e-53 211.5 172 65.1
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.1e-52 210.7 120 87.5
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 2.5e-52 209.5 237 55.7
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 5.6e-52 208.4 190 61.6
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.3e-51 207.2 223 55.2
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 1.6e-51 206.8 185 63.8
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 2.1e-51 206.5 145 73.8
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 4.8e-51 205.3 218 54.1
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.0e-50 202.2 194 57.2
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 6.9e-50 201.4 207 59.4
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 1.2e-49 200.7 204 59.8
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 5.8e-49 198.4 220 51.8
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.0e-48 197.6 203 59.6
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 2.9e-48 196.1 219 55.7
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 3.2e-47 192.6 171 65.5
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 5.5e-47 191.8 194 59.3
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 1.2e-46 190.7 169 58.0
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 1.3e-45 187.2 211 52.6
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 5.1e-45 185.3 173 60.7
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 7.4e-44 181.4 171 60.8
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.7e-43 179.1 173 59.0
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 2.4e-42 176.4 144 66.0
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 6.9e-42 174.9 172 58.7
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.2e-41 174.1 171 59.6
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.2e-41 174.1 133 66.2
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 4.5e-41 172.2 125 72.0
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.0e-40 171.0 171 57.3
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 1.7e-40 170.2 136 66.2
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 6.5e-40 168.3 130 67.7
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 1.9e-39 166.8 103 83.5
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.2e-39 166.0 178 56.2
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 2.7e-38 162.9 148 64.2
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 3.0e-37 159.5 199 48.7
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 3.9e-37 159.1 107 78.5
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 1.9e-36 156.8 133 57.9
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 3.7e-27 125.9 155 46.5
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 4.5e-25 119.0 151 45.7
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 1.8e-21 107.1 62 88.7
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 6.3e-19 98.6 185 36.8
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 6.3e-19 98.6 94 62.8
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 5.9e-17 92.0 88 55.7
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 2.1e-14 83.6 116 37.1
Cpa.g.sc43.61 Carica papaya HOM05D002231 ORTHO05D006103 2.2e-11 73.6 105 49.5
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.1e-10 71.2 51 66.7
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 2.9e-08 63.2 39 71.8
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 2.5e-07 60.1 59 64.4


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