Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 3.0e-204 714.9 352 100.0
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 4.2e-158 561.6 356 80.1
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 1.6e-157 559.7 354 81.1
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 8.0e-157 557.4 358 77.7
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 2.3e-156 555.8 352 77.3
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 5.2e-156 554.7 351 77.8
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 6.8e-156 554.3 354 79.4
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 8.8e-156 553.9 353 79.3
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 8.8e-156 553.9 362 76.5
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.5e-155 553.1 351 77.8
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 3.4e-155 552.0 353 77.9
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 3.4e-155 552.0 356 78.4
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 5.7e-155 551.2 360 76.7
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 9.8e-155 550.4 351 77.8
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 2.2e-154 549.3 359 78.0
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 2.2e-154 549.3 360 77.2
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 8.3e-154 547.4 359 77.7
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 2.4e-153 545.8 358 76.0
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 8.6e-151 537.3 366 73.2
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 1.1e-150 537.0 366 72.7
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 1.1e-150 537.0 357 76.8
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 1.5e-150 536.6 354 76.0
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 1.5e-150 536.6 358 77.4
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 5.6e-150 534.6 364 74.5
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 5.6e-150 534.6 364 74.5
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 7.2e-150 534.3 366 73.2
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 1.2e-149 533.5 368 73.1
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.1e-149 532.7 364 73.6
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.8e-149 532.3 365 74.0
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 2.8e-149 532.3 363 75.5
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 3.6e-149 531.9 359 74.7
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 4.7e-149 531.6 353 76.5
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 1.0e-148 530.4 358 77.9
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.0e-148 530.4 365 73.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 4.0e-148 528.5 367 73.0
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.2e-148 528.1 360 75.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.2e-148 528.1 360 75.6
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 1.5e-147 526.6 361 71.5
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 2.0e-147 526.2 365 72.1
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.0e-147 526.2 353 75.6
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 4.4e-147 525.0 360 74.4
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 5.7e-147 524.6 354 74.6
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.5e-147 524.2 359 75.2
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 3.7e-146 521.9 374 73.5
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 3.7e-146 521.9 374 73.5
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 2.4e-145 519.2 366 72.7
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 4.1e-145 518.5 357 71.1
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 4.1e-145 518.5 359 74.7
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 5.4e-145 518.1 358 75.7
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 5.4e-145 518.1 436 64.9
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 7.0e-145 517.7 366 71.3
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 7.0e-145 517.7 363 74.1
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 2.7e-144 515.8 365 70.1
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 3.5e-144 515.4 360 75.0
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 4.6e-144 515.0 366 71.0
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 4.6e-144 515.0 366 71.0
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 4.6e-144 515.0 366 71.0
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 5.9e-144 514.6 355 73.8
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 1.0e-143 513.8 352 73.6
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 1.3e-143 513.5 354 73.2
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 3.9e-143 511.9 361 69.3
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.1e-142 510.4 355 74.9
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 2.5e-142 509.2 357 73.1
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 3.3e-142 508.8 361 73.1
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 4.7e-141 505.0 327 77.4
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.4e-140 503.4 283 89.4
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.4e-140 503.4 362 71.5
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 8.9e-140 500.7 368 70.9
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 3.4e-139 498.8 363 70.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.4e-139 498.4 352 72.7
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 4.4e-139 498.4 376 69.4
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 7.5e-139 497.7 342 75.1
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 1.3e-138 496.9 359 71.3
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 4.9e-138 495.0 323 79.3
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 4.9e-138 495.0 353 72.8
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 6.4e-138 494.6 352 71.3
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 8.3e-138 494.2 362 70.2
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.4e-137 493.4 324 76.2
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 1.4e-137 493.4 359 70.8
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.4e-137 493.4 359 70.8
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 7.0e-137 491.1 359 70.5
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 9.2e-137 490.7 328 76.2
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 7.8e-136 487.6 359 69.9
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 3.3e-134 482.3 352 68.5
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 1.2e-133 480.3 357 70.9
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 2.1e-133 479.6 367 67.0
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 3.6e-133 478.8 358 68.4
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 8.9e-132 474.2 355 68.7
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 8.9e-132 474.2 358 68.7
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 1.2e-131 473.8 349 68.8
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 4.4e-131 471.9 357 67.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 4.4e-131 471.9 351 69.2
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 5.8e-131 471.5 354 67.5
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 9.8e-131 470.7 329 74.2
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.5e-126 456.8 359 65.5
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 2.5e-126 456.1 353 67.4
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 4.3e-126 455.3 356 66.3
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.6e-125 453.4 357 66.4
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 6.8e-124 448.0 352 65.1
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.6e-123 446.0 364 63.7
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 3.2e-121 439.1 334 68.3
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 4.3e-118 428.7 352 62.2
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 4.7e-117 425.2 370 61.9
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.8e-116 423.3 373 61.4
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.6e-115 419.5 291 74.6
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 9.9e-115 417.5 290 76.2
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 9.9e-115 417.5 361 60.1
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.4e-113 412.9 354 61.3
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 2.4e-113 412.9 352 59.9
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 8.4e-106 387.9 361 57.9
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.1e-105 387.5 353 58.1
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.4e-105 387.1 337 58.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.4e-105 385.2 326 63.5
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 7.1e-105 384.8 315 61.9
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 6.2e-101 371.7 194 91.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 5.8e-99 365.2 356 56.7
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 4.9e-98 362.1 228 77.6
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.1e-97 360.9 302 58.9
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 7.9e-96 354.8 194 85.6
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 3.9e-95 352.4 357 52.7
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.9e-94 350.1 306 59.5
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.9e-94 350.1 194 86.1
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.7e-93 345.9 353 51.6
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.4e-92 343.2 290 60.3
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 5.3e-92 342.0 303 55.4
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 3.4e-67 259.6 153 79.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 8.2e-61 238.4 210 60.0
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.9e-58 229.9 126 84.1
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.2e-48 198.0 211 52.6
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 2.6e-46 190.3 139 71.9
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.4e-46 189.9 100 88.0
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.8e-45 186.0 91 91.2
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 4.1e-44 183.0 187 56.1
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 1.0e-34 151.8 229 46.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 3.6e-32 143.3 156 53.8
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 8.9e-31 138.7 103 71.8
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 3.7e-29 133.3 88 76.1
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.0e-28 129.0 164 49.4
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 2.0e-27 127.5 73 76.7
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 3.5e-27 126.7 73 76.7
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 5.2e-15 86.3 43 88.4
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 6.8e-15 85.9 120 40.0
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 5.8e-06 56.2 71 50.7


User provided reference genes

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