Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 2.2e-82 308.9 158 100.0
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 2.9e-34 149.1 156 55.8
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 8.6e-34 147.5 153 54.2
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 4.4e-22 108.6 138 43.5
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 9.2e-20 100.9 136 41.9
FAN06G4503 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.6e-19 100.1 146 49.3
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 7.8e-19 97.8 142 38.0
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 2.3e-18 96.3 116 44.8
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 5.6e-17 91.7 138 42.8
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.6e-17 91.7 107 43.9
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.8e-16 89.4 107 43.9
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 2.8e-16 89.4 122 45.9
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 3.6e-16 89.0 108 49.1
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.6e-16 89.0 100 46.0
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.6e-16 89.0 107 43.9
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 6.2e-16 88.2 107 43.9
Prupe.2G180200 Prunus persica HOM05D015530 ORTHO05D008136 8.1e-16 87.8 141 39.7
Prupe.2G180000 Prunus persica HOM05D015530 ORTHO05D008136 1.8e-15 86.7 147 39.5
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.8e-15 86.7 104 43.3
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 3.1e-15 85.9 145 36.6
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.0e-15 85.5 104 43.3
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.4e-14 82.0 95 45.3
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 4.9e-13 78.6 119 41.2
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.1e-12 77.4 119 42.0
GSVIVG01001261001 Vitis vinifera HOM05D008848 ORTHO05D008136 1.4e-12 77.0 142 38.0
Medtr7g075160 Medicago truncatula HOM05D028937 ORTHO05D008136 5.4e-12 75.1 141 36.9
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 7.1e-12 74.7 122 37.7
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 9.2e-12 74.3 115 40.9
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 1.6e-11 73.6 82 47.6
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 2.1e-11 73.2 85 44.7
Prupe.2G180300 Prunus persica HOM05D015530 ORTHO05D008136 2.1e-11 73.2 133 40.6
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 2.1e-11 73.2 109 40.4
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.1e-11 73.2 124 37.1
Eucgr.D00561 Eucalyptus grandis HOM05D008848 ORTHO05D008136 4.6e-11 72.0 101 47.5
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 1.0e-10 70.9 129 35.7
FvH4_7g15661 Fragaria vesca HOM05D033618 ORTHO05D008136 1.3e-10 70.5 120 41.7
FAN06G1921 Fragaria x ananassa HOM05D033618 ORTHO05D008136 1.3e-10 70.5 125 41.6
Glyma.18G222000 Glycine max HOM05D028937 ORTHO05D008136 1.3e-10 70.5 140 35.0
Ciclev10006601m.g Citrus clementina HOM05D010926 ORTHO05D011735 3.0e-10 69.3 99 36.4
FAN21G0420 Fragaria x ananassa HOM05D015530 ORTHO05D008136 3.0e-10 69.3 169 36.7
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 6.6e-10 68.2 115 37.4
FvH4_3g38201 Fragaria vesca HOM05D015530 ORTHO05D008136 1.1e-09 67.4 111 41.4
Ciclev10006726m.g Citrus clementina HOM05D010926 ORTHO05D011735 1.5e-09 67.0 118 33.1
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 3.3e-09 65.9 124 36.3
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 3.3e-09 65.9 108 37.0
Potri.014G061133 Populus trichocarpa HOM05D010926 ORTHO05D011735 4.3e-09 65.5 128 29.7
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.3e-09 65.5 121 33.1
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 5.6e-09 65.1 120 33.3
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 5.6e-09 65.1 135 33.3
Dinv06358 Davidia involucrata HOM05D028634 ORTHO05D022500 1.6e-08 63.5 106 36.8
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 1.6e-08 63.5 119 36.1
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.6e-08 63.5 121 32.2
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 2.1e-08 63.2 108 34.3
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 2.1e-08 63.2 110 39.1
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 2.1e-08 63.2 106 37.7
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 2.8e-08 62.8 110 37.3
Peaxi162Scf01083g00013 Petunia axillaris HOM05D008848 ORTHO05D008136 2.8e-08 62.8 116 35.3
Potri.014G061266 Populus trichocarpa HOM05D010926 ORTHO05D011735 4.7e-08 62.0 128 28.9
Oeu018043.1 Olea europaea HOM05D009287 ORTHO05D008136 6.2e-08 61.6 113 38.9
Potri.001G135925 Populus trichocarpa HOM05D010926 ORTHO05D011735 6.2e-08 61.6 128 28.1
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.2e-08 61.6 118 33.9
Dinv06361 Davidia involucrata HOM05D028634 ORTHO05D022500 8.1e-08 61.2 87 39.1
Oeu036307.1 Olea europaea HOM05D009287 ORTHO05D008136 8.1e-08 61.2 101 40.6
Sabra14G0045000 Salix brachista HOM05D010926 ORTHO05D011735 8.1e-08 61.2 112 32.1
Oeu026046.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-07 60.8 157 33.8
Glyma.07G061900 Glycine max HOM05D008683 ORTHO05D010884 1.4e-07 60.5 113 38.1
Ciclev10007031m.g Citrus clementina HOM05D010926 ORTHO05D011735 1.8e-07 60.1 96 35.4
Lalb_Chr07g0190261 Lupinus albus HOM05D017052 ORTHO05D011735 1.8e-07 60.1 94 37.2
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 1.8e-07 60.1 110 37.3
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.8e-07 60.1 121 32.2
Glyma.07G061700 Glycine max HOM05D008683 ORTHO05D010884 2.3e-07 59.7 113 38.1
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 2.3e-07 59.7 125 35.2
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.3e-07 59.7 121 32.2
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 3.1e-07 59.3 105 38.1
FAN06G1149 Fragaria x ananassa HOM05D027471 ORTHO05D012876 4.0e-07 58.9 133 32.3
MD07G1115400 Malus domestica HOM05D010926 ORTHO05D011735 5.2e-07 58.5 142 32.4
Psat4g213640 Pisum sativum HOM05D008683 ORTHO05D010884 5.2e-07 58.5 102 36.3
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.2e-07 58.5 102 35.3
FvH4_1g13031 Fragaria vesca HOM05D026089 ORTHO05D008136 6.8e-07 58.2 136 34.6
Nitab4.5_0003050g0040 Nicotiana tabacum HOM05D008848 ORTHO05D008136 6.8e-07 58.2 68 44.1
QL04p038362 Quercus lobata HOM05D010926 ORTHO05D011735 6.8e-07 58.2 103 36.9
Glyma.07G062000 Glycine max HOM05D008683 ORTHO05D010884 8.9e-07 57.8 135 33.3
FAN11G2821 Fragaria x ananassa HOM05D015530 ORTHO05D008136 1.2e-06 57.4 88 43.2
Medtr8g028350 Medicago truncatula HOM05D008683 ORTHO05D010884 1.2e-06 57.4 130 33.1
Oeu015938.1 Olea europaea HOM05D009287 ORTHO05D008136 1.2e-06 57.4 128 35.9
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.2e-06 57.4 98 36.7
Prupe.2G180100 Prunus persica HOM05D015530 ORTHO05D008136 1.5e-06 57.0 93 41.9
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 1.5e-06 57.0 103 35.9
DCAR_002190 Daucus carota HOM05D020340 ORTHO05D008136 2.0e-06 56.6 92 41.3
Glyma.07G065900 Glycine max HOM05D008683 ORTHO05D010884 2.0e-06 56.6 89 38.2
Medtr8g028275 Medicago truncatula HOM05D008683 ORTHO05D010884 2.6e-06 56.2 137 31.4
Oeu026050.1 Olea europaea HOM05D009287 ORTHO05D008136 2.6e-06 56.2 165 31.5
Rhsim07G0114400 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.4e-06 55.8 97 37.1
Prupe.2G143100 Prunus persica HOM05D012558 ORTHO05D012876 4.4e-06 55.5 99 37.4
Rhsim07G0113500 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.4e-06 55.5 97 36.1
FAN06G4246 Fragaria x ananassa HOM05D027471 ORTHO05D012876 5.8e-06 55.1 133 31.6
Rhsim07G0112900 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.8e-06 55.1 107 33.6
FAN01G0086 Fragaria x ananassa HOM05D027471 ORTHO05D012876 7.6e-06 54.7 133 31.6
Phvul.010G103650 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 7.6e-06 54.7 99 37.4
Glyma.07G066200 Glycine max HOM05D008683 ORTHO05D010884 9.9e-06 54.3 108 37.0
Phvul.010G103450 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 9.9e-06 54.3 116 31.9
Phvul.010G103500 Phaseolus vulgaris HOM05D008683 ORTHO05D010884 9.9e-06 54.3 116 31.9


User provided reference genes

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