Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.7e-42 175.6 90 100.0
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 4.4e-27 124.4 93 64.5
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 9.9e-27 123.2 93 66.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.3e-26 122.9 93 67.7
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.7e-26 122.5 93 67.7
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 2.2e-26 122.1 93 66.7
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 6.4e-26 120.6 93 63.4
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 5.4e-25 117.5 94 63.8
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 7.1e-25 117.1 89 61.8
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.2e-24 116.3 93 65.6
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.6e-24 115.9 94 63.8
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 2.1e-24 115.5 95 66.3
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 6.0e-24 114.0 88 67.0
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.3e-23 112.8 86 66.3
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.7e-23 112.5 90 64.4
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.1e-23 110.9 90 64.4
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 5.1e-23 110.9 90 64.4
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 5.1e-23 110.9 89 62.9
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.1e-22 109.8 88 62.5
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.1e-22 109.8 91 60.4
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.9e-22 109.0 91 64.8
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.9e-22 109.0 89 60.7
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 5.6e-22 107.5 93 59.1
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 5.6e-22 107.5 89 61.8
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 7.3e-22 107.1 91 58.2
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.2e-21 106.3 89 61.8
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 2.1e-21 105.5 89 60.7
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 2.1e-21 105.5 93 61.3
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 2.8e-21 105.1 83 61.4
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 2.8e-21 105.1 89 56.2
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.6e-21 104.8 89 60.7
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 8.1e-21 103.6 94 57.4
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 8.1e-21 103.6 83 67.5
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 1.4e-20 102.8 89 56.2
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-20 102.8 89 55.1
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.4e-20 102.8 89 55.1
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.4e-20 102.8 89 56.2
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 1.4e-20 102.8 92 59.8
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.8e-20 102.4 85 58.8
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.8e-20 102.4 89 56.2
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 2.4e-20 102.1 89 55.1
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 2.4e-20 102.1 89 55.1
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.4e-20 102.1 87 60.9
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 3.1e-20 101.7 94 58.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 4.0e-20 101.3 89 56.2
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 4.0e-20 101.3 89 56.2
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 4.0e-20 101.3 89 56.2
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 6.8e-20 100.5 89 59.6
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 8.9e-20 100.1 89 52.8
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 1.5e-19 99.4 90 54.4
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 1.5e-19 99.4 93 59.1
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.0e-19 99.0 90 57.8
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 2.6e-19 98.6 89 51.7
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 3.4e-19 98.2 89 57.3
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 4.4e-19 97.8 89 58.4
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 5.8e-19 97.4 89 50.6
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 7.6e-19 97.1 89 57.3
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 9.9e-19 96.7 87 55.2
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.3e-18 96.3 81 56.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.7e-18 95.9 89 57.3
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 2.9e-18 95.1 91 59.3
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 2.9e-18 95.1 82 58.5
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 3.8e-18 94.7 89 55.1
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 3.8e-18 94.7 89 55.1
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 4.9e-18 94.4 78 62.8
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 4.9e-18 94.4 90 53.3
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 4.9e-18 94.4 90 53.3
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 6.4e-18 94.0 90 57.8
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 1.4e-17 92.8 89 50.6
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.9e-17 92.4 90 55.6
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 2.4e-17 92.0 90 56.7
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 2.4e-17 92.0 90 54.4
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 2.4e-17 92.0 90 54.4
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 3.2e-17 91.7 59 64.4
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 4.2e-17 91.3 82 56.1
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 4.2e-17 91.3 89 55.1
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 7.1e-17 90.5 82 61.0
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.2e-16 89.7 89 50.6
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.2e-16 89.7 89 51.7
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.2e-16 89.7 91 58.2
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 1.6e-16 89.4 79 54.4
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 2.7e-16 88.6 90 57.8
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 3.5e-16 88.2 119 46.2
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 4.6e-16 87.8 90 53.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 4.6e-16 87.8 90 56.7
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 6.0e-16 87.4 72 58.3
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.0e-15 86.7 75 60.0
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.3e-15 86.3 58 65.5
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.7e-15 85.9 85 54.1
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 2.3e-15 85.5 83 54.2
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.0e-15 85.1 83 54.2
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 5.1e-15 84.3 57 59.6
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 8.7e-15 83.6 85 54.1
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 8.7e-15 83.6 92 53.3
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.1e-14 83.2 91 53.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.1e-14 83.2 91 53.8
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.3e-14 81.3 91 50.5
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 7.3e-14 80.5 81 54.3
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.6e-13 79.3 91 50.5
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 2.1e-13 79.0 82 52.4
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 3.6e-13 78.2 90 50.0
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 3.6e-13 78.2 91 49.5
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 3.6e-13 78.2 91 49.5
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.7e-13 77.8 91 49.5
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 4.7e-13 77.8 92 51.1
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 6.2e-13 77.4 59 62.7
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 6.2e-13 77.4 91 49.5
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.1e-12 76.6 69 60.9
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.4e-12 76.3 90 47.8
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 2.4e-12 75.5 83 48.2
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.1e-12 75.1 78 53.8
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 5.3e-12 74.3 80 51.2
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 2.0e-11 72.4 84 47.6
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 5.8e-11 70.9 83 45.8
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 7.6e-11 70.5 75 57.3
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 1.3e-10 69.7 57 54.4
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 2.9e-10 68.6 86 46.5
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 4.9e-10 67.8 82 46.3
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 6.4e-10 67.4 75 54.7
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.4e-09 66.2 81 50.6
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.4e-09 66.2 77 46.8
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.9e-09 65.9 85 49.4
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 4.2e-09 64.7 78 55.1
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 9.3e-09 63.5 78 42.3
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 3.5e-08 61.6 51 54.9
Nn6g34798 Nelumbo nucifera HOM05D005659 ORTHO05D007059 3.3e-06 55.1 32 71.9
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 3.3e-06 55.1 40 60.0


User provided reference genes

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