Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.8e-205 719.2 398 100.0
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.9e-162 576.2 326 84.4
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 4.6e-161 571.6 339 80.5
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.8e-160 569.7 333 80.5
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.3e-160 569.3 345 80.6
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.9e-159 566.2 325 83.1
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 3.3e-159 565.5 333 80.2
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 3.7e-158 562.0 330 80.3
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 6.3e-158 561.2 332 79.5
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 6.9e-157 557.8 330 79.7
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 1.2e-156 557.0 330 81.2
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.5e-156 556.6 327 80.1
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 2.2e-155 552.7 332 80.7
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 9.4e-154 547.4 333 77.5
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.2e-153 547.0 327 81.0
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 3.6e-153 545.4 332 79.2
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 7.9e-153 544.3 340 76.8
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.0e-152 542.3 327 80.7
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 3.0e-152 542.3 329 79.3
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 7.4e-151 537.7 331 77.9
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 4.1e-149 531.9 327 75.8
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 4.1e-149 531.9 336 74.4
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 6.9e-149 531.2 331 77.9
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 9.1e-149 530.8 327 75.5
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 9.1e-149 530.8 341 74.5
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.2e-148 530.4 329 74.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 2.0e-148 529.6 330 74.5
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 2.2e-147 526.2 397 67.3
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.9e-147 525.8 339 75.2
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 5.0e-147 525.0 333 73.0
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 3.2e-146 522.3 331 74.6
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.2e-146 521.9 330 76.4
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 4.2e-146 521.9 330 76.4
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.2e-145 520.4 325 76.0
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 1.6e-145 520.0 339 72.3
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 3.6e-145 518.8 330 74.8
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 5.1e-144 515.0 396 67.7
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 5.1e-144 515.0 326 74.8
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.0e-143 513.1 333 73.9
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 3.3e-143 512.3 316 79.7
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.3e-143 512.3 311 79.1
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 5.7e-143 511.5 334 73.7
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 2.8e-142 509.2 330 73.0
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 1.4e-141 506.9 398 65.6
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.4e-141 506.9 349 71.9
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 1.4e-141 506.9 398 68.3
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.3e-141 505.0 337 72.7
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.2e-140 503.8 332 71.7
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 5.9e-140 501.5 342 70.5
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.2e-139 499.6 337 71.5
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.8e-139 498.8 329 71.1
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 8.5e-139 497.7 332 70.2
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 2.5e-138 496.1 442 59.7
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.2e-138 495.7 332 72.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 4.2e-138 495.4 328 70.7
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 5.5e-138 495.0 325 71.7
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 4.7e-137 491.9 330 70.6
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 4.7e-137 491.9 338 68.9
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 4.7e-137 491.9 333 69.7
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 4.7e-137 491.9 331 70.4
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 6.1e-137 491.5 345 68.4
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 8.0e-137 491.1 325 71.4
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 8.0e-137 491.1 349 69.9
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.0e-136 490.7 329 70.8
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 1.0e-136 490.7 330 70.0
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.1e-135 487.3 329 69.6
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 1.5e-135 486.9 331 70.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 2.0e-135 486.5 341 68.3
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 3.3e-135 485.7 328 71.0
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 4.4e-135 485.3 330 69.7
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 5.7e-135 485.0 324 69.4
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.7e-134 483.4 339 68.4
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 2.2e-134 483.0 330 70.0
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 2.2e-134 483.0 330 70.0
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 8.2e-134 481.1 343 69.1
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.8e-133 479.9 335 67.2
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 5.3e-133 478.4 325 70.2
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.2e-132 477.2 330 68.5
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.0e-132 476.5 341 67.7
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 2.0e-132 476.5 341 67.7
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.5e-132 475.7 362 64.6
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.5e-132 475.7 368 64.4
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 3.5e-132 475.7 364 64.8
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 7.7e-132 474.6 330 69.7
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.2e-131 473.0 332 68.7
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 3.8e-131 472.2 341 67.2
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 6.5e-131 471.5 353 64.6
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 5.5e-130 468.4 323 69.7
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 2.3e-128 463.0 338 66.6
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 4.0e-128 462.2 285 77.9
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 2.2e-126 456.4 330 67.0
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 3.8e-123 445.7 341 61.3
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 3.2e-122 442.6 351 63.0
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 4.2e-122 442.2 312 66.3
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.2e-121 440.7 295 68.8
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 2.7e-121 439.5 333 66.1
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 8.8e-120 434.5 323 63.2
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 4.5e-116 422.2 274 76.6
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 5.5e-114 415.2 311 65.6
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.2e-108 397.5 331 58.3
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.6e-105 387.1 248 74.6
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.3e-102 377.5 345 57.7
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.0e-100 370.2 340 54.4
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.6e-92 344.0 338 52.1
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.3e-88 330.1 232 69.4
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.6e-87 326.6 314 51.3
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.4e-87 326.2 314 51.6
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 4.3e-42 176.4 99 78.8
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 3.8e-38 163.3 94 78.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 8.8e-35 152.1 352 33.8
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 2.5e-29 134.0 138 53.6
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.8e-22 110.2 79 62.0
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 8.0e-20 102.4 52 90.4
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 1.4e-19 101.7 64 64.1
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.4e-16 90.9 66 63.6
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.4e-16 90.9 51 84.3
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 9.1e-16 89.0 53 79.2
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 1.3e-09 68.6 127 35.4


User provided reference genes

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