Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 8.4e-61 236.9 123 100.0
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 2.3e-34 149.1 106 80.2
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 2.8e-24 115.5 107 66.4
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.4e-18 96.7 96 59.4
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 1.4e-18 96.7 118 54.2
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 3.9e-18 95.1 96 58.3
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 1.5e-17 93.2 94 60.6
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.8e-16 89.0 96 56.2
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.8e-15 86.3 79 59.5
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 1.8e-15 86.3 94 57.4
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 3.1e-15 85.5 95 54.7
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 9.1e-15 84.0 97 59.8
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 9.1e-15 84.0 97 54.6
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.3e-13 80.1 105 56.2
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 2.2e-13 79.3 105 54.3
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 2.9e-13 79.0 100 54.0
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 6.5e-13 77.8 97 51.5
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 6.5e-13 77.8 100 53.0
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 1.9e-12 76.3 67 70.1
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 3.2e-12 75.5 113 51.3
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 7.2e-12 74.3 109 52.3
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 7.2e-12 74.3 109 51.4
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 7.2e-12 74.3 103 52.4
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 9.4e-12 73.9 109 48.6
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.7e-11 72.4 107 49.5
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 4.7e-11 71.6 76 60.5
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 7.9e-11 70.9 100 50.0
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 7.9e-11 70.9 106 46.2
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 1.0e-10 70.5 109 47.7
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 1.8e-10 69.7 95 47.4
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 2.3e-10 69.3 106 48.1
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 2.3e-10 69.3 100 46.0
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 3.9e-10 68.6 105 47.6
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 3.9e-10 68.6 90 55.6
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 5.1e-10 68.2 100 48.0
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 8.8e-10 67.4 108 47.2
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 8.8e-10 67.4 105 46.7
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 1.1e-09 67.0 105 47.6
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 1.5e-09 66.6 106 48.1
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.5e-09 66.6 94 48.9
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 1.5e-09 66.6 65 58.5
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 2.0e-09 66.2 105 44.8
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 2.0e-09 66.2 105 46.7
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.0e-09 66.2 100 45.0
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 2.0e-09 66.2 116 44.0
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 2.6e-09 65.9 107 48.6
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 2.6e-09 65.9 105 44.8
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.6e-09 65.9 100 45.0
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 4.4e-09 65.1 71 52.1
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 7.4e-09 64.3 62 62.9
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 1.3e-08 63.5 77 53.2
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 2.8e-08 62.4 101 47.5
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 3.7e-08 62.0 108 44.4
TAR633G0657 Trochodendron aralioides HOM05D008128 ORTHO05D010259 8.2e-08 60.8 87 50.6
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 1.1e-07 60.5 65 56.9
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 1.4e-07 60.1 114 45.6
Ciclev10029344m.g Citrus clementina HOM05D008128 ORTHO05D010259 4.1e-07 58.5 112 40.2
Atru.chr3.3366 Acer truncatum HOM05D008128 ORTHO05D010259 9.1e-07 57.4 93 47.3
Sed0019677 Sechium edule HOM05D008128 ORTHO05D010259 2.0e-06 56.2 60 55.0
CDE06G1241 Ceratophyllum demersum HOM05D008128 ORTHO05D010259 4.5e-06 55.1 104 43.3


User provided reference genes

Program Settings