Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G152190 Manihot esculenta HOM05D007663 ORTHO05D009455 2.1e-55 219.2 146 100.0
Manes.11G152105 Manihot esculenta HOM05D007663 ORTHO05D009455 1.1e-54 216.9 146 99.3
Manes.11G152042 Manihot esculenta HOM05D007663 ORTHO05D009455 4.0e-54 214.9 145 98.6
Manes.05G009249 Manihot esculenta HOM05D007663 ORTHO05D009455 4.6e-50 201.4 146 94.5
Manes.07G134100 Manihot esculenta HOM05D007663 ORTHO05D009455 6.2e-47 191.0 93 98.9
Manes.11G152127 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-46 189.1 93 97.8
Manes.11G152141 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-46 189.1 93 97.8
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-46 189.1 93 97.8
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-46 189.1 93 97.8
Manes.11G152184 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-46 189.1 93 97.8
Manes.07G133012 Manihot esculenta HOM05D007663 ORTHO05D009455 5.8e-45 184.5 93 96.8
Manes.07G064632 Manihot esculenta HOM05D007663 ORTHO05D009455 1.8e-38 162.9 93 88.2
Sabra10G0142400 Salix brachista HOM05D007663 ORTHO05D009455 5.3e-30 134.8 83 74.7
Thecc.10G011700 Theobroma cacao HOM05D007663 ORTHO05D009455 1.4e-27 126.7 98 61.2
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 1.6e-26 123.2 100 60.0
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 2.6e-24 115.9 94 60.6
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 7.4e-24 114.4 95 63.2
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 9.7e-24 114.0 98 58.2
COL.COLO4_25779 Corchorus olitorius HOM05D007663 ORTHO05D009455 6.3e-23 111.3 102 57.8
Haze_17265 Corylus avellana HOM05D007663 ORTHO05D009455 6.3e-23 111.3 95 62.1
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 8.2e-23 110.9 102 57.8
Gorai.012G078700 Gossypium raimondii HOM05D007663 ORTHO05D009455 8.2e-23 110.9 102 57.8
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 1.8e-22 109.8 94 56.4
Cfa001285 Carpinus fangiana HOM05D000718 ORTHO05D006723 2.4e-22 109.4 95 61.1
CANSAT56G3657 Cannabis sativa HOM05D007663 ORTHO05D009455 4.1e-22 108.6 97 56.7
Gohir.A05G331600 Gossypium hirsutum HOM05D007663 ORTHO05D009455 5.3e-22 108.2 102 56.9
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 5.3e-22 108.2 94 54.3
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 5.3e-22 108.2 92 58.7
CiPaw.01G301100 Carya illinoinensis HOM05D007663 ORTHO05D009455 2.0e-21 106.3 94 58.5
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 3.8e-20 102.1 96 57.3
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 3.8e-20 102.1 96 57.3
Actinidia33912 Actinidia chinensis HOM05D007663 ORTHO05D009455 5.0e-20 101.7 95 56.8
Cc02_g05740 Coffea canephora HOM05D007663 ORTHO05D009455 5.0e-20 101.7 93 58.1
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 5.0e-20 101.7 95 54.7
Potri.010G185200 Populus trichocarpa HOM05D007663 ORTHO05D009455 8.5e-20 100.9 70 67.1
vmacro06952 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 8.5e-20 100.9 96 56.2
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 8.5e-20 100.9 96 56.2
Atru.chr12.76 Acer truncatum HOM05D007663 ORTHO05D009455 1.9e-19 99.8 95 55.8
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 1.6e-18 96.7 97 55.7
Migut.F00643 Erythranthe guttata HOM05D007663 ORTHO05D009455 1.4e-17 93.6 93 50.5
ECA238G2021 Erigeron canadensis HOM05D007663 ORTHO05D009455 2.3e-17 92.8 95 51.6
Nitab4.5_0000409g0130 Nicotiana tabacum HOM05D007663 ORTHO05D009455 6.7e-17 91.3 94 48.9
Lsat_1_v5_gn_2_124440 Lactuca sativa HOM05D007663 ORTHO05D009455 1.5e-16 90.1 94 51.1
Ciclev10031427m.g Citrus clementina HOM05D007663 ORTHO05D009455 3.3e-16 89.0 97 52.6
Nitab4.5_0001222g0010 Nicotiana tabacum HOM05D007663 ORTHO05D009455 3.3e-16 89.0 94 48.9
PGSC0003DMG400027722 Solanum tuberosum HOM05D007663 ORTHO05D009455 9.7e-16 87.4 94 48.9
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 2.2e-15 86.3 94 45.7
Solyc03g095860.3 Solanum lycopersicum HOM05D007663 ORTHO05D009455 2.8e-15 85.9 94 48.9
CAN.G156.14 Capsicum annuum HOM05D007663 ORTHO05D009455 1.4e-14 83.6 94 47.9
SalBow3G1672 Salvia bowleyana HOM05D007663 ORTHO05D009455 1.4e-14 83.6 93 50.5
Sopen03g025840 Solanum pennellii HOM05D007663 ORTHO05D009455 1.4e-14 83.6 94 46.8
Aqoxy2G00815 Aquilegia oxysepala HOM05D007663 ORTHO05D009455 5.3e-14 81.6 91 44.0
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 7.0e-14 81.3 121 40.5
Peaxi162Scf00304g00013 Petunia axillaris HOM05D007663 ORTHO05D009455 1.6e-13 80.1 93 48.4
Manes.07G133005 Manihot esculenta HOM05D007663 ORTHO05D009455 4.5e-13 78.6 37 97.3
MSTRG.27307 Avicennia marina HOM05D007663 ORTHO05D009455 4.0e-09 65.5 70 47.1
Lj8A63T91 Lonicera japonica HOM05D007663 ORTHO05D009455 4.4e-08 62.0 92 43.5
Prupe.2G254900 Prunus persica HOM05D007663 ORTHO05D009455 9.7e-08 60.8 101 38.6
Atru.chr12.71 Acer truncatum HOM05D007663 ORTHO05D009455 1.7e-07 60.1 95 38.9
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 2.2e-07 59.7 59 54.2
CANSAT35G1813 Cannabis sativa HOM05D007663 ORTHO05D009455 1.1e-06 57.4 34 76.5


User provided reference genes

Program Settings