Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 7.4e-151 537.7 334 100.0
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 7.7e-132 474.6 304 100.0
Manes.11G152127 Manihot esculenta HOM05D007663 ORTHO05D009455 1.8e-128 463.4 299 96.3
Manes.11G152042 Manihot esculenta HOM05D007663 ORTHO05D009455 6.1e-121 438.3 400 72.8
Manes.07G134100 Manihot esculenta HOM05D007663 ORTHO05D009455 6.6e-107 391.7 295 87.1
Manes.11G152141 Manihot esculenta HOM05D007663 ORTHO05D009455 1.5e-106 390.6 276 91.7
Manes.11G152184 Manihot esculenta HOM05D007663 ORTHO05D009455 2.4e-101 373.2 185 100.0
Manes.11G152105 Manihot esculenta HOM05D007663 ORTHO05D009455 1.5e-98 364.0 185 98.4
Manes.05G009249 Manihot esculenta HOM05D007663 ORTHO05D009455 1.5e-95 354.0 185 96.8
Manes.07G064632 Manihot esculenta HOM05D007663 ORTHO05D009455 1.7e-91 340.5 296 79.4
Sabra10G0142400 Salix brachista HOM05D007663 ORTHO05D009455 5.6e-74 282.3 284 72.2
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 1.3e-73 281.2 292 64.0
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 9.9e-71 271.6 292 66.4
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 3.2e-69 266.5 294 67.7
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 1.8e-67 260.8 320 64.1
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 2.3e-67 260.4 323 60.7
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 3.3e-66 256.5 312 58.7
Potri.010G185200 Populus trichocarpa HOM05D007663 ORTHO05D009455 1.3e-65 254.6 285 70.9
CiPaw.01G301100 Carya illinoinensis HOM05D007663 ORTHO05D009455 1.6e-65 254.2 282 69.5
CANSAT56G3657 Cannabis sativa HOM05D007663 ORTHO05D009455 1.1e-64 251.5 304 61.2
Manes.07G133012 Manihot esculenta HOM05D007663 ORTHO05D009455 4.0e-64 249.6 196 95.9
COL.COLO4_25779 Corchorus olitorius HOM05D007663 ORTHO05D009455 1.0e-62 245.0 305 62.6
Cfa001285 Carpinus fangiana HOM05D000718 ORTHO05D006723 6.5e-62 242.3 283 64.3
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 8.4e-62 241.9 299 59.5
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 8.4e-62 241.9 299 59.5
Haze_17265 Corylus avellana HOM05D007663 ORTHO05D009455 1.1e-61 241.5 294 61.9
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 1.1e-61 241.5 302 56.6
Gorai.012G078700 Gossypium raimondii HOM05D007663 ORTHO05D009455 2.1e-60 237.3 301 64.8
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 2.3e-59 233.8 306 63.4
Gohir.A05G331600 Gossypium hirsutum HOM05D007663 ORTHO05D009455 2.1e-57 227.3 301 63.5
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 2.1e-57 227.3 275 59.6
Ciclev10031427m.g Citrus clementina HOM05D007663 ORTHO05D009455 1.3e-54 218.0 324 58.3
Cc02_g05740 Coffea canephora HOM05D007663 ORTHO05D009455 6.5e-54 215.7 287 52.3
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 6.5e-54 215.7 276 57.6
PGSC0003DMG400027722 Solanum tuberosum HOM05D007663 ORTHO05D009455 6.5e-54 215.7 292 55.5
Aqoxy2G00815 Aquilegia oxysepala HOM05D007663 ORTHO05D009455 5.5e-53 212.6 296 61.1
Nitab4.5_0000409g0130 Nicotiana tabacum HOM05D007663 ORTHO05D009455 5.5e-53 212.6 286 54.9
Solyc03g095860.3 Solanum lycopersicum HOM05D007663 ORTHO05D009455 1.2e-52 211.5 292 54.5
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 2.7e-52 210.3 303 50.5
Lsat_1_v5_gn_2_124440 Lactuca sativa HOM05D007663 ORTHO05D009455 2.7e-52 210.3 303 51.2
Sopen03g025840 Solanum pennellii HOM05D007663 ORTHO05D009455 3.5e-52 209.9 292 53.1
Actinidia33912 Actinidia chinensis HOM05D007663 ORTHO05D009455 6.7e-51 205.7 218 55.0
Migut.F00643 Erythranthe guttata HOM05D007663 ORTHO05D009455 6.7e-51 205.7 279 55.6
Thecc.10G011700 Theobroma cacao HOM05D007663 ORTHO05D009455 8.7e-51 205.3 185 58.4
CAN.G156.14 Capsicum annuum HOM05D007663 ORTHO05D009455 1.9e-50 204.1 290 54.5
Nitab4.5_0001222g0010 Nicotiana tabacum HOM05D007663 ORTHO05D009455 1.9e-50 204.1 297 52.9
Manes.07G133005 Manihot esculenta HOM05D007663 ORTHO05D009455 3.3e-50 203.4 296 59.8
ECA238G2021 Erigeron canadensis HOM05D007663 ORTHO05D009455 1.3e-49 201.4 273 56.8
SalBow3G1672 Salvia bowleyana HOM05D007663 ORTHO05D009455 1.4e-48 198.0 283 55.8
MD01G1157100 Malus domestica HOM05D007663 ORTHO05D009455 5.0e-46 189.5 287 44.3
Manes.11G152190 Manihot esculenta HOM05D007663 ORTHO05D009455 5.0e-46 189.5 93 97.8
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 5.0e-46 189.5 287 41.5
Atru.chr12.76 Acer truncatum HOM05D007663 ORTHO05D009455 1.1e-45 188.3 216 53.2
Prupe.2G254900 Prunus persica HOM05D007663 ORTHO05D009455 2.5e-45 187.2 314 40.4
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 1.2e-44 184.9 309 48.2
vmacro06952 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 1.2e-44 184.9 282 54.3
RcHm_v2.0_Chr1g0370871 Rosa chinensis HOM05D007663 ORTHO05D009455 9.7e-42 175.3 290 42.8
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 1.0e-38 165.2 325 46.2
MSTRG.27307 Avicennia marina HOM05D007663 ORTHO05D009455 1.3e-38 164.9 288 49.3
Peaxi162Scf00304g00013 Petunia axillaris HOM05D007663 ORTHO05D009455 1.3e-38 164.9 297 49.5
arahy.Tifrunner.gnm1.ann1.CJK2YY Arachis hypogaea HOM05D007663 ORTHO05D009455 3.6e-36 156.8 298 37.9
arahy.Tifrunner.gnm1.ann1.QDW8X7 Arachis hypogaea HOM05D007663 ORTHO05D009455 4.7e-36 156.4 298 37.9
Manes.07G064566 Manihot esculenta HOM05D000718 ORTHO05D009455 4.7e-36 156.4 285 41.1
Lj8A63T91 Lonicera japonica HOM05D007663 ORTHO05D009455 1.8e-35 154.5 313 37.7
Ca_05987_v3 Cicer arietinum L. HOM05D007663 ORTHO05D009455 1.5e-34 151.4 294 35.0
Lalb_Chr04g0250441 Lupinus albus HOM05D007663 ORTHO05D009455 1.1e-32 145.2 294 37.4
FvH4_7g24970 Fragaria vesca HOM05D007663 ORTHO05D009455 5.9e-31 139.4 307 38.1
FAN06G1368 Fragaria x ananassa HOM05D007663 ORTHO05D009455 5.9e-31 139.4 307 38.1
FAN01G2334 Fragaria x ananassa HOM05D007663 ORTHO05D009455 1.7e-30 137.9 307 37.8
Psat2g031520 Pisum sativum HOM05D007663 ORTHO05D009455 3.8e-30 136.7 294 33.7
VMungo0647G1650 Vigna mungo HOM05D007663 ORTHO05D009455 1.5e-29 134.8 172 48.8
Glyma.02G263600 Glycine max HOM05D007663 ORTHO05D009455 2.5e-29 134.0 216 40.7
Medtr8g056020 Medicago truncatula HOM05D007663 ORTHO05D009455 1.6e-28 131.3 294 34.0
LjContig00357g0015684 Lotus japonicus HOM05D007663 ORTHO05D009455 2.7e-28 130.6 222 40.5
FAN03G1333 Fragaria x ananassa HOM05D007663 ORTHO05D009455 1.0e-27 128.6 307 35.8
Phvul.008G221600 Phaseolus vulgaris HOM05D007663 ORTHO05D009455 2.6e-26 124.0 168 47.0
Eucgr.J00178 Eucalyptus grandis HOM05D007663 ORTHO05D009455 3.1e-24 117.1 285 33.0
Atru.chr12.71 Acer truncatum HOM05D007663 ORTHO05D009455 1.3e-22 111.7 216 38.9
PGR044G1292 Punica granatum HOM05D007663 ORTHO05D009455 1.9e-21 107.8 320 31.2
SGA_v2.0_scaffold44G16663 Striga asiatica HOM05D007663 ORTHO05D009455 1.9e-21 107.8 286 30.8
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 8.0e-20 102.4 280 30.4
TPR.G38411 Trifolium pratense HOM05D007663 ORTHO05D009455 3.4e-18 97.1 319 28.5
Zm00001eb368510 Zea mays HOM05D007663 ORTHO05D009455 2.8e-17 94.0 266 30.8
CANSAT35G1813 Cannabis sativa HOM05D007663 ORTHO05D009455 5.4e-16 89.7 135 70.4
Actinidia29715 Actinidia chinensis HOM05D007663 ORTHO05D009455 3.8e-14 83.6 85 54.1
FvH4_2g24420 Fragaria vesca HOM05D007464 ORTHO05D009388 3.7e-09 67.0 331 39.6
FAN24G2954 Fragaria x ananassa HOM05D007464 ORTHO05D009388 3.7e-09 67.0 331 39.6
FAN27G3498 Fragaria x ananassa HOM05D007464 ORTHO05D009388 3.7e-09 67.0 334 38.6
FAN20G1108 Fragaria x ananassa HOM05D007464 ORTHO05D009388 1.8e-08 64.7 331 38.4
FAN10G3031 Fragaria x ananassa HOM05D007663 ORTHO05D009455 7.0e-08 62.8 52 61.5
CANSAT56G2616 Cannabis sativa HOM05D007663 ORTHO05D009455 9.2e-08 62.4 137 48.9
FAN15G0926 Fragaria x ananassa HOM05D007464 ORTHO05D009388 5.9e-07 59.7 331 38.4
Sopen09g029120 Solanum pennellii HOM05D007464 ORTHO05D009388 5.9e-07 59.7 285 30.2
MD07G1225900 Malus domestica HOM05D007663 ORTHO05D009455 1.7e-06 58.2 43 67.4
PGSC0003DMG400034780 Solanum tuberosum HOM05D007464 ORTHO05D009388 2.3e-06 57.8 285 30.9
PGSC0003DMG402003815 Solanum tuberosum HOM05D007464 ORTHO05D009388 2.3e-06 57.8 285 30.9
Sopen09g029110 Solanum pennellii HOM05D007464 ORTHO05D009388 2.9e-06 57.4 286 30.1
QL07p017897 Quercus lobata HOM05D006239 ORTHO05D008159 5.0e-06 56.6 316 25.0
SalBow2G2643 Salvia bowleyana HOM05D007464 ORTHO05D009388 5.0e-06 56.6 250 34.0
Cpa.g.sc9.143 Carica papaya HOM05D007464 ORTHO05D009388 6.6e-06 56.2 264 22.3
Solyc09g074290.1 Solanum lycopersicum HOM05D007464 ORTHO05D009388 6.6e-06 56.2 285 30.2
Oeu059718.1 Olea europaea HOM05D007663 ORTHO05D009455 8.6e-06 55.8 45 62.2


User provided reference genes

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