Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G145200 Manihot esculenta HOM05D005728 ORTHO05D005733 2.7e-56 221.9 118 100.0
Manes.04G021300 Manihot esculenta HOM05D005728 ORTHO05D005733 1.1e-38 163.3 118 74.6
Potri.004G211000 Populus trichocarpa HOM05D005728 ORTHO05D005733 3.3e-30 135.2 120 62.5
Duzib168G0076 Durio zibethinus HOM05D005728 ORTHO05D005733 2.2e-26 122.5 119 59.7
Potri.009G013800 Populus trichocarpa HOM05D005728 ORTHO05D005733 2.9e-26 122.1 118 62.7
Duzib150G0774 Durio zibethinus HOM05D005728 ORTHO05D005733 7.1e-25 117.5 119 58.0
QL01p022229 Quercus lobata HOM05D005728 ORTHO05D005733 2.1e-24 115.9 119 57.1
CiPaw.13G113100 Carya illinoinensis HOM05D005728 ORTHO05D005733 4.6e-24 114.8 119 55.5
Ciclev10029550m.g Citrus clementina HOM05D005728 ORTHO05D005733 6.0e-24 114.4 110 60.0
Thecc.09G340800 Theobroma cacao HOM05D005728 ORTHO05D005733 1.3e-23 113.2 121 56.2
Glyma.12G067500 Glycine max HOM05D005728 ORTHO05D005733 8.7e-23 110.5 119 54.6
Glyma.11G146600 Glycine max HOM05D005728 ORTHO05D005733 1.1e-22 110.2 113 55.8
TWI31G0058 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 2.5e-22 109.0 118 55.1
TWI79G1513 Tripterygium wilfordii HOM05D005728 ORTHO05D005733 5.6e-22 107.8 119 55.5
FAN16G2914 Fragaria x ananassa HOM05D005728 ORTHO05D005733 1.6e-21 106.3 112 56.2
FvH4_3g32270 Fragaria vesca HOM05D005728 ORTHO05D005733 2.1e-21 105.9 112 56.2
FAN11G0683 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.1e-21 105.9 112 56.2
FAN21G3175 Fragaria x ananassa HOM05D005728 ORTHO05D005733 2.1e-21 105.9 112 56.2
MD03G1117800 Malus domestica HOM05D005728 ORTHO05D005733 2.1e-21 105.9 112 53.6
RcHm_v2.0_Chr5g0059071 Rosa chinensis HOM05D005728 ORTHO05D005733 2.1e-21 105.9 112 56.2
Duzib170G0319 Durio zibethinus HOM05D005728 ORTHO05D005733 4.8e-21 104.8 114 54.4
Gohir.D05G102800 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.2e-21 104.4 120 54.2
Gorai.009G107100 Gossypium raimondii HOM05D005728 ORTHO05D005733 6.2e-21 104.4 120 54.2
Haze_23825 Corylus avellana HOM05D005728 ORTHO05D005733 8.1e-21 104.0 120 56.7
FAN25G2087 Fragaria x ananassa HOM05D005728 ORTHO05D005733 8.1e-21 104.0 112 55.4
CANSAT54G0421 Cannabis sativa HOM05D005728 ORTHO05D005733 1.4e-20 103.2 124 56.5
Phvul.011G079200 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 1.4e-20 103.2 113 51.3
Sabra04G0142500 Salix brachista HOM05D005728 ORTHO05D005733 1.4e-20 103.2 121 49.6
VMungo0403G0001 Vigna mungo HOM05D005728 ORTHO05D005733 1.4e-20 103.2 113 51.3
Gohir.A05G103100 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.4e-20 102.4 120 53.3
Sed0004216 Sechium edule HOM05D005728 ORTHO05D005733 3.1e-20 102.1 120 52.5
arahy.Tifrunner.gnm1.ann1.X5FS8C Arachis hypogaea HOM05D005728 ORTHO05D005733 9.0e-20 100.5 113 52.2
Sabra09G0007800 Salix brachista HOM05D005728 ORTHO05D005733 9.0e-20 100.5 124 52.4
Phvul.005G135400 Phaseolus vulgaris HOM05D005728 ORTHO05D005733 2.0e-19 99.4 106 51.9
Eucgr.B02498 Eucalyptus grandis HOM05D005728 ORTHO05D005733 2.6e-19 99.0 120 55.0
CSS0032457 Camellia sinensis var. sinensis HOM05D005728 ORTHO05D005733 3.4e-19 98.6 118 50.8
Gohir.D08G215300 Gossypium hirsutum HOM05D005728 ORTHO05D005733 4.5e-19 98.2 120 50.0
MELO3C020692.2 Cucumis melo HOM05D005728 ORTHO05D005733 5.8e-19 97.8 120 50.8
Gorai.004G228900 Gossypium raimondii HOM05D005728 ORTHO05D005733 7.6e-19 97.4 120 50.0
Glyma.12G172600 Glycine max HOM05D005728 ORTHO05D005733 9.9e-19 97.1 113 49.6
Sed0003209 Sechium edule HOM05D005728 ORTHO05D005733 9.9e-19 97.1 121 49.6
TAR629G0455 Trochodendron aralioides HOM05D005728 ORTHO05D005733 9.9e-19 97.1 120 50.8
PGR102G3095 Punica granatum HOM05D005728 ORTHO05D005733 1.3e-18 96.7 107 50.5
Rhsim01G0216600 Rhododendron simsii HOM05D005728 ORTHO05D005733 1.7e-18 96.3 114 49.1
VMungo1080G1182 Vigna mungo HOM05D005728 ORTHO05D005733 1.7e-18 96.3 106 50.9
Gohir.A08G197900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.2e-18 95.9 120 50.0
Peaxi162Scf00270g00082 Petunia axillaris HOM05D005728 ORTHO05D005733 2.2e-18 95.9 114 50.9
Glyma.13G326000 Glycine max HOM05D005728 ORTHO05D005733 2.9e-18 95.5 106 51.9
MD11G1136100 Malus domestica HOM05D005728 ORTHO05D005733 1.1e-17 93.6 119 50.4
Hma1.2p1_0058F.1_g032530 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.9e-17 92.8 118 51.7
Lalb_Chr14g0374671 Lupinus albus HOM05D005728 ORTHO05D005733 2.4e-17 92.4 112 52.7
Psat5g279440 Pisum sativum HOM05D005728 ORTHO05D005733 2.4e-17 92.4 118 47.5
Prupe.6G101500 Prunus persica HOM05D005728 ORTHO05D005733 3.2e-17 92.0 114 50.0
TPR.G11537 Trifolium pratense HOM05D005728 ORTHO05D005733 5.4e-17 91.3 112 50.0
Nn2g10793 Nelumbo nucifera HOM05D005728 ORTHO05D005733 7.1e-17 90.9 124 46.0
THA.LOC104800607 Tarenaya hassleriana HOM05D005728 ORTHO05D005733 7.1e-17 90.9 112 50.0
Lalb_Chr19g0137271 Lupinus albus HOM05D005728 ORTHO05D005733 9.3e-17 90.5 112 49.1
Cfa011317 Carpinus fangiana HOM05D005728 ORTHO05D005733 1.2e-16 90.1 119 49.6
Ca_01413_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 2.7e-16 89.0 112 50.9
ECA248G1213 Erigeron canadensis HOM05D005728 ORTHO05D005733 2.7e-16 89.0 99 50.5
Rhsim01G0216400 Rhododendron simsii HOM05D005728 ORTHO05D005733 2.7e-16 89.0 107 47.7
RhsimUnG0058600 Rhododendron simsii HOM05D005728 ORTHO05D005733 3.5e-16 88.6 104 48.1
Solyc11g069420.2 Solanum lycopersicum HOM05D005728 ORTHO05D005733 3.5e-16 88.6 117 45.3
Atru.chr3.3629 Acer truncatum HOM05D005728 ORTHO05D005733 7.9e-16 87.4 123 44.7
Sopen11g028140 Solanum pennellii HOM05D005728 ORTHO05D005733 1.0e-15 87.0 116 44.8
Cpa.g.sc216.7 Carica papaya HOM05D005728 ORTHO05D005733 1.8e-15 86.3 118 50.0
PGSC0003DMG400008077 Solanum tuberosum HOM05D005728 ORTHO05D005733 1.8e-15 86.3 117 43.6
Lj3g0009869 Lotus japonicus HOM05D005728 ORTHO05D005733 3.0e-15 85.5 113 49.6
Cc01_g11120 Coffea canephora HOM05D005728 ORTHO05D005733 6.7e-15 84.3 118 47.5
Gohir.D03G134400 Gossypium hirsutum HOM05D005728 ORTHO05D005733 6.7e-15 84.3 120 49.2
Medtr4g059310 Medicago truncatula HOM05D005728 ORTHO05D005733 6.7e-15 84.3 112 47.3
Sc15g0002200 Simmondsia chinensis HOM05D005728 ORTHO05D005733 6.7e-15 84.3 115 44.3
CsaV3_1G033730 Cucumis sativus L. HOM05D005728 ORTHO05D005733 1.1e-14 83.6 114 47.4
Lsat_1_v5_gn_1_65300 Lactuca sativa HOM05D005728 ORTHO05D005733 1.9e-14 82.8 110 42.7
HanXRQChr01g0016901 Helianthus annuus HOM05D005728 ORTHO05D005733 2.5e-14 82.4 112 43.8
Nitab4.5_0000650g0250 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.5e-14 82.4 118 44.9
Lj3g0014252 Lotus japonicus HOM05D005728 ORTHO05D005733 3.3e-14 82.0 104 49.0
Carub.0004s0935 Capsella rubella HOM05D005728 ORTHO05D005733 5.6e-14 81.3 111 48.6
TPR.G15560 Trifolium pratense HOM05D005728 ORTHO05D005733 5.6e-14 81.3 119 42.9
Aqoxy1G01237 Aquilegia oxysepala HOM05D005728 ORTHO05D005733 9.6e-14 80.5 123 44.7
Medtr2g094210 Medicago truncatula HOM05D005728 ORTHO05D005733 9.6e-14 80.5 114 47.4
A07p18980 Brassica napus HOM05D005728 ORTHO05D005733 1.6e-13 79.7 107 45.8
BraA07t29603Z Brassica rapa HOM05D005728 ORTHO05D005733 1.6e-13 79.7 107 45.8
AL4G21610 Arabidopsis lyrata HOM05D005728 ORTHO05D005733 2.1e-13 79.3 115 47.0
Nitab4.5_0012712g0010 Nicotiana tabacum HOM05D005728 ORTHO05D005733 2.1e-13 79.3 118 43.2
Gohir.A03G033900 Gossypium hirsutum HOM05D005728 ORTHO05D005733 2.8e-13 79.0 120 47.5
AT2G28410 Arabidopsis thaliana HOM05D005728 ORTHO05D005733 3.7e-13 78.6 117 45.3
BcaB06g28212 Brassica carinata HOM05D005728 ORTHO05D005733 3.7e-13 78.6 107 44.9
CARHR121360 Cardamine hirsuta HOM05D005728 ORTHO05D005733 4.8e-13 78.2 116 47.4
Sp4g11230 Schrenkiella parvula HOM05D005728 ORTHO05D005733 6.2e-13 77.8 111 43.2
EL10Ac9g22516 Beta vulgaris HOM05D005728 ORTHO05D005733 1.1e-12 77.0 118 41.5
C04p22970 Brassica napus HOM05D005728 ORTHO05D005733 1.8e-12 76.3 108 47.2
Hma1.2p1_0055F.1_g031560 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 1.8e-12 76.3 116 44.0
Psat7g225080 Pisum sativum HOM05D005728 ORTHO05D005733 3.1e-12 75.5 119 43.7
BcaC02g08173 Brassica carinata HOM05D005728 ORTHO05D005733 4.0e-12 75.1 115 43.5
C04p57650 Brassica napus HOM05D005728 ORTHO05D005733 4.0e-12 75.1 115 43.5
BolC4t27283H Brassica oleracea HOM05D005728 ORTHO05D005733 5.3e-12 74.7 115 42.6
Hma1.2p1_2468F.1_g322665 Hydrangea macrophylla HOM05D005728 ORTHO05D005733 5.3e-12 74.7 116 43.1
Thhalv10017443m.g Eutrema salsugineum HOM05D005728 ORTHO05D005733 9.0e-12 73.9 107 45.8
PSO339G2100 Papaver somniferum HOM05D005728 ORTHO05D005733 9.0e-12 73.9 126 46.0
A04p21550 Brassica napus HOM05D005728 ORTHO05D005733 1.2e-11 73.6 113 40.7
BolC4t23791H Brassica oleracea HOM05D005728 ORTHO05D005733 1.2e-11 73.6 108 46.3
BraA04t17719Z Brassica rapa HOM05D005728 ORTHO05D005733 1.2e-11 73.6 113 40.7
Ah.01g002910 Amaranthus hybridus HOM05D005728 ORTHO05D005733 2.0e-11 72.8 112 42.9
PSO063G1604 Papaver somniferum HOM05D005728 ORTHO05D005733 2.6e-11 72.4 126 45.2
Aa31LG5G7800 Aethionema arabicum HOM05D005728 ORTHO05D005733 5.8e-11 71.2 112 45.5
Oeu002871.1 Olea europaea HOM05D005728 ORTHO05D005733 9.9e-11 70.5 110 43.6
SGA_v2.0_scaffold2G00890 Striga asiatica HOM05D005728 ORTHO05D005733 3.8e-10 68.6 107 42.1
DCAR_018811 Daucus carota HOM05D005728 ORTHO05D005733 6.4e-10 67.8 120 40.0
ECA238G1730 Erigeron canadensis HOM05D005728 ORTHO05D005733 6.4e-10 67.8 120 41.7
CiPaw.14G080700 Carya illinoinensis HOM05D005728 ORTHO05D005733 8.4e-10 67.4 113 45.1
MSTRG.17803 Avicennia marina HOM05D005728 ORTHO05D005733 1.1e-09 67.0 114 43.0
AUR62024979 Chenopodium quinoa HOM05D005728 ORTHO05D005733 2.4e-09 65.9 121 37.2
Ca_19255_v3 Cicer arietinum L. HOM05D005728 ORTHO05D005733 3.2e-09 65.5 114 42.1
Oeu059090.1 Olea europaea HOM05D005728 ORTHO05D005733 3.2e-09 65.5 114 43.0
MBI10_g13404_MAGBIO Magnolia biondii HOM05D005728 ORTHO05D005733 1.2e-08 63.5 131 38.9
AUR62039639 Chenopodium quinoa HOM05D005728 ORTHO05D005733 1.0e-07 60.5 122 37.7
Nitab4.5_0000106g0140 Nicotiana tabacum HOM05D005728 ORTHO05D005733 3.0e-07 58.9 121 35.5
Ah.01g014340 Amaranthus hybridus HOM05D005728 ORTHO05D005733 8.7e-07 57.4 108 39.8
A03p11060 Brassica napus HOM05D010860 ORTHO05D005733 1.5e-06 56.6 130 35.4
BraA03t10420Z Brassica rapa HOM05D010860 ORTHO05D005733 1.5e-06 56.6 130 35.4
arahy.Tifrunner.gnm1.ann1.5L1A31 Arachis hypogaea HOM05D005728 ORTHO05D005733 3.3e-06 55.5 114 34.2


User provided reference genes

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