Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 2.0e-86 322.4 163 100.0
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 7.9e-59 230.7 163 71.2
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 3.0e-58 228.8 160 70.6
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 3.0e-58 228.8 160 70.6
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 8.8e-58 227.3 161 68.9
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.1e-57 226.9 158 70.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 2.6e-57 225.7 160 66.9
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 5.7e-57 224.6 159 71.1
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 7.4e-57 224.2 158 65.8
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 4.8e-56 221.5 158 70.9
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.1e-55 220.3 161 68.3
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 9.1e-55 217.2 162 66.0
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.2e-54 216.9 163 67.5
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.5e-54 216.5 162 66.0
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 7.7e-54 214.2 146 70.5
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 7.7e-54 214.2 158 67.1
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.3e-53 213.4 160 65.6
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.8e-53 211.8 158 66.5
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 5.0e-53 211.5 162 66.7
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 5.0e-53 211.5 160 65.0
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.1e-52 210.3 158 66.5
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.1e-52 210.3 158 67.7
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 5.5e-52 208.0 160 63.8
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 7.2e-52 207.6 160 63.8
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 9.4e-52 207.2 160 64.4
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.2e-51 206.8 158 65.8
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 1.6e-51 206.5 158 66.5
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 1.6e-51 206.5 162 62.3
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 2.1e-51 206.1 159 67.3
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.6e-51 205.3 146 67.1
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 8.0e-51 204.1 146 67.1
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 1.4e-50 203.4 144 68.1
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 5.2e-50 201.4 156 60.9
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 8.8e-50 200.7 142 67.6
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.1e-49 200.3 151 64.2
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 1.1e-49 200.3 162 61.1
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 1.5e-49 199.9 158 62.7
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 2.6e-49 199.1 161 65.8
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 5.7e-49 198.0 155 62.6
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 9.7e-49 197.2 156 59.6
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.7e-48 196.4 157 61.8
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 2.2e-48 196.1 156 59.6
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 2.8e-48 195.7 156 60.3
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 3.7e-48 195.3 157 59.9
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 6.3e-48 194.5 142 65.5
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.1e-47 193.7 156 60.3
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.1e-47 193.7 156 59.6
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 1.4e-47 193.4 156 59.0
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.8e-47 193.0 158 59.5
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.8e-47 193.0 157 60.5
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.4e-47 192.6 156 59.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 2.4e-47 192.6 141 64.5
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 3.1e-47 192.2 156 60.3
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 3.1e-47 192.2 158 58.2
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 4.1e-47 191.8 154 62.3
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 5.3e-47 191.4 163 60.1
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 5.3e-47 191.4 136 71.3
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 5.3e-47 191.4 160 57.5
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 7.0e-47 191.0 156 60.3
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 7.0e-47 191.0 159 58.5
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.6e-46 189.9 154 62.3
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.6e-46 189.9 136 71.3
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.6e-46 189.9 156 60.9
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 2.6e-46 189.1 154 57.8
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 4.5e-46 188.3 157 59.9
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 4.5e-46 188.3 136 67.6
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 5.9e-46 188.0 138 64.5
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 5.9e-46 188.0 158 60.8
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 7.7e-46 187.6 139 65.5
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.7e-45 186.4 160 59.4
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.7e-45 186.4 156 58.3
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 2.9e-45 185.7 155 58.7
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 5.0e-45 184.9 164 57.9
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 8.5e-45 184.1 140 62.1
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.1e-44 183.7 141 61.7
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.9e-44 183.0 158 55.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 2.5e-44 182.6 157 56.1
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 5.5e-44 181.4 141 61.0
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 5.5e-44 181.4 141 61.7
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 5.5e-44 181.4 158 56.3
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 5.5e-44 181.4 172 55.2
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 9.4e-44 180.6 158 57.0
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 9.4e-44 180.6 158 57.0
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 1.2e-43 180.3 135 63.0
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.1e-43 179.5 143 60.1
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 2.7e-43 179.1 155 57.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 4.7e-43 178.3 156 56.4
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 6.1e-43 177.9 132 62.1
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 1.0e-42 177.2 157 56.1
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.0e-42 177.2 159 56.6
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 1.4e-42 176.8 158 58.9
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.8e-42 176.4 159 56.0
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 2.3e-42 176.0 136 62.5
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 3.0e-42 175.6 133 59.4
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 1.5e-41 173.3 137 58.4
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 2.6e-41 172.6 161 56.5
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 4.4e-41 171.8 147 59.9
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 2.8e-40 169.1 125 64.8
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 4.8e-40 168.3 114 71.1
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 8.3e-40 167.5 141 56.0
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 8.3e-40 167.5 115 70.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 9.1e-39 164.1 147 53.7
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 1.6e-38 163.3 132 59.8
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 2.0e-38 162.9 140 60.0
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.5e-36 156.8 111 67.6
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 3.6e-35 152.1 137 53.3
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 1.8e-34 149.8 137 57.7
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 2.3e-34 149.4 112 66.1
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 5.2e-34 148.3 141 54.6
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 2.6e-33 146.0 165 49.7
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 2.8e-32 142.5 113 60.2
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 5.4e-31 138.3 135 45.2
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 2.7e-30 136.0 152 46.7
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.1e-27 126.3 132 44.7
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 5.7e-25 118.2 132 47.0
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 4.9e-24 115.2 76 69.7
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 2.4e-23 112.8 132 44.7
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 7.0e-23 111.3 117 51.3
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 5.9e-22 108.2 89 56.2
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 5.6e-20 101.7 127 44.1
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.8e-19 99.4 140 40.0
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 4.7e-19 98.6 90 53.3
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.0e-18 97.4 157 38.2
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.9e-16 89.4 64 65.6
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 3.7e-16 89.0 89 52.8
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 1.4e-15 87.0 136 36.8
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 1.7e-13 80.1 72 55.6
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 8.6e-13 77.8 71 53.5
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 9.5e-12 74.3 76 47.4
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.3e-08 63.9 52 57.7
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 1.9e-07 60.1 41 63.4


User provided reference genes

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