Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 9.9e-163 576.6 273 100.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 5.8e-131 471.1 270 79.6
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 2.9e-130 468.8 273 79.5
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 4.9e-130 468.0 273 78.4
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 5.5e-129 464.5 264 81.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.6e-128 463.0 273 78.0
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 2.1e-128 462.6 267 79.4
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.0e-127 460.3 268 79.5
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.8e-127 459.5 270 78.5
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 3.0e-127 458.8 266 78.9
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.9e-127 458.4 271 76.8
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 3.9e-127 458.4 271 76.8
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 1.1e-126 456.8 266 78.2
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.9e-126 456.1 271 76.0
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 4.3e-126 454.9 273 75.5
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 2.2e-125 452.6 264 78.8
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-125 452.6 273 73.6
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.2e-125 452.6 273 73.6
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.1e-124 450.3 270 77.8
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.8e-124 449.5 270 75.9
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 5.3e-124 448.0 273 75.8
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 3.8e-122 441.8 266 75.9
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.1e-121 440.3 265 76.2
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.9e-121 439.5 263 75.3
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 2.5e-121 439.1 263 76.8
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.5e-121 438.0 245 81.2
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.6e-120 436.4 274 74.8
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 2.7e-120 435.6 274 72.3
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 2.7e-120 435.6 262 75.6
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 4.6e-120 434.9 273 72.9
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 7.9e-120 434.1 273 72.9
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.4e-119 433.3 273 73.6
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.1e-118 430.3 273 72.2
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.5e-118 429.9 266 74.8
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.5e-118 429.9 270 73.3
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 1.5e-118 429.9 263 74.9
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 2.0e-118 429.5 248 77.8
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 5.7e-118 427.9 274 71.2
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 9.7e-118 427.2 263 73.0
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 9.7e-118 427.2 264 72.0
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.3e-117 426.8 257 77.0
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 2.2e-117 426.0 268 73.9
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 2.2e-117 426.0 259 73.7
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 2.8e-117 425.6 273 72.2
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 3.7e-117 425.2 264 73.9
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.1e-116 423.7 273 71.4
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 1.1e-116 423.7 265 74.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 1.4e-116 423.3 273 71.4
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.4e-116 423.3 273 71.4
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 1.4e-116 423.3 257 74.3
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 2.4e-116 422.5 268 73.9
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 9.1e-116 420.6 265 73.2
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 2.6e-115 419.1 270 70.7
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 3.4e-115 418.7 281 70.5
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 7.7e-115 417.5 263 70.3
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 1.3e-114 416.8 263 73.0
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 3.2e-113 412.1 248 75.4
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 2.1e-112 409.5 264 70.5
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 4.7e-112 408.3 269 70.3
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 1.4e-111 406.8 265 67.9
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 8.8e-111 404.1 265 69.1
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 8.8e-111 404.1 261 69.0
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.5e-110 403.3 261 68.6
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 3.3e-110 402.1 268 69.0
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 5.7e-110 401.4 251 73.3
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.7e-109 399.8 291 63.9
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 3.7e-109 398.7 267 68.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 4.8e-109 398.3 235 77.4
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.0e-107 392.9 254 71.7
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 3.8e-106 388.7 249 70.3
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 1.1e-105 387.1 251 69.3
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 8.0e-104 380.9 292 64.7
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 8.0e-104 380.9 265 66.4
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.4e-100 369.4 256 68.0
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 7.0e-100 367.9 256 68.0
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 7.7e-99 364.4 222 73.0
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 3.8e-98 362.1 254 63.0
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 2.1e-96 356.3 243 68.7
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 1.4e-95 353.6 243 68.3
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 1.3e-93 347.1 236 65.3
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 8.3e-93 344.4 235 66.8
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 3.8e-90 335.5 235 66.4
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 4.0e-87 325.5 194 75.3
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 4.4e-86 322.0 228 64.0
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.3e-85 320.5 175 82.9
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 5.4e-84 315.1 193 72.5
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.5e-78 297.0 183 71.0
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 3.4e-78 295.8 237 56.5
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 5.7e-78 295.0 274 54.4
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 3.7e-77 292.4 162 82.1
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.7e-74 283.5 263 46.0
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 6.6e-74 281.6 236 50.0
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 1.1e-73 280.8 186 70.4
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 8.0e-64 248.1 150 78.0
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.5e-62 243.8 148 70.9
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.7e-53 213.8 188 55.9
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 4.9e-53 212.2 139 69.8
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 4.9e-53 212.2 161 56.5
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 9.2e-52 208.0 138 71.0
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.6e-51 205.7 131 75.6
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.6e-51 205.7 131 75.6
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.7e-50 203.8 129 65.9
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 1.2e-48 197.6 111 82.0
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 3.0e-42 176.4 131 64.9
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 2.8e-40 169.9 104 71.2
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.9e-34 149.4 237 34.2
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 9.0e-31 138.3 240 38.3
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 9.9e-30 134.8 171 45.0
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 2.1e-27 127.1 113 55.8
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 2.7e-27 126.7 95 65.3
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.3e-26 124.4 70 81.4
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.4e-20 104.4 68 70.6
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 3.9e-18 96.3 60 73.3
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.1e-16 90.5 43 93.0
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 2.1e-16 90.5 43 93.0
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 9.0e-15 85.1 77 51.9
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 1.0e-13 81.6 146 32.9
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 7.1e-12 75.5 41 80.5
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 1.3e-10 71.2 59 52.5
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 3.0e-10 70.1 53 56.6
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.1e-09 68.2 40 72.5
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.1e-09 68.2 40 72.5
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 1.9e-09 67.4 147 28.6
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 7.4e-09 65.5 74 50.0
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 2.2e-08 63.9 88 44.3
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 6.3e-08 62.4 37 67.6
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 2.4e-07 60.5 36 66.7
HanXRQChr12g0365531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.5e-06 57.8 86 40.7


User provided reference genes

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