Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 6.4e-125 451.1 279 100.0
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 9.0e-87 324.3 216 71.8
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 1.5e-86 323.6 216 70.8
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 2.0e-86 323.2 274 59.5
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 7.6e-86 321.2 214 73.8
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 1.7e-85 320.1 204 78.9
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 5.0e-85 318.5 216 70.4
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 6.5e-85 318.2 216 70.4
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.4e-84 317.0 214 70.6
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 4.2e-84 315.5 237 69.2
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 5.5e-84 315.1 227 70.9
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 6.1e-83 311.6 212 70.8
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 3.9e-82 308.9 213 70.9
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 3.3e-81 305.8 217 69.1
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 7.4e-81 304.7 207 72.9
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 2.2e-80 303.1 213 69.5
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 6.3e-80 301.6 212 70.3
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 8.2e-80 301.2 219 68.5
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 1.8e-79 300.1 212 70.8
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 3.1e-79 299.3 210 69.5
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 2.0e-78 296.6 219 69.9
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 3.4e-78 295.8 203 70.0
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 1.3e-77 293.9 214 68.2
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.1e-76 290.8 202 69.3
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.9e-76 290.0 214 67.8
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.5e-76 289.7 204 70.6
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 3.2e-76 289.3 201 67.2
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 4.2e-76 288.9 206 68.0
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 5.5e-76 288.5 214 65.9
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 7.2e-76 288.1 208 67.3
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.2e-75 287.3 216 65.7
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.6e-75 287.0 203 68.0
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 1.6e-75 287.0 203 68.5
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 2.1e-75 286.6 214 64.5
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 2.1e-75 286.6 218 65.6
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.7e-75 286.2 203 68.0
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 4.6e-75 285.4 209 67.9
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.6e-75 285.4 228 64.5
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 1.4e-74 283.9 202 66.3
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.8e-74 283.5 217 64.1
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 3.0e-74 282.7 214 66.4
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 6.7e-74 281.6 220 63.6
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 1.1e-73 280.8 213 63.8
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 1.1e-73 280.8 214 67.8
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 2.6e-73 279.6 209 65.1
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 3.3e-73 279.3 213 62.4
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 1.7e-72 276.9 197 67.0
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 2.2e-72 276.6 213 61.5
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 2.2e-72 276.6 213 62.0
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 2.2e-72 276.6 215 64.2
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 4.8e-72 275.4 225 61.3
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 4.8e-72 275.4 213 60.6
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 4.8e-72 275.4 209 64.1
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 8.2e-72 274.6 233 59.7
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 8.2e-72 274.6 212 61.8
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 8.2e-72 274.6 213 61.0
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 8.2e-72 274.6 213 61.0
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 8.2e-72 274.6 213 61.0
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 1.1e-71 274.2 218 61.5
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 1.4e-71 273.9 223 61.4
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 3.1e-71 272.7 212 61.3
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 4.1e-71 272.3 189 71.4
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 4.1e-71 272.3 174 81.6
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 6.9e-71 271.6 203 65.5
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 2.6e-70 269.6 234 60.3
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 4.5e-70 268.9 238 60.1
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 2.2e-69 266.5 202 63.9
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 2.9e-69 266.2 193 68.4
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 3.8e-69 265.8 190 67.9
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 8.5e-69 264.6 203 62.6
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 2.5e-68 263.1 203 64.0
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 4.2e-68 262.3 204 62.7
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 2.1e-67 260.0 214 59.8
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 4.7e-67 258.8 202 61.9
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.8e-66 256.9 203 64.0
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 2.3e-66 256.5 203 64.5
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 3.9e-66 255.8 175 69.7
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 6.7e-66 255.0 201 63.7
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 2.6e-65 253.1 220 57.3
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 3.3e-65 252.7 202 62.4
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 1.3e-64 250.8 220 57.7
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 2.2e-64 250.0 188 64.4
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.2e-64 248.1 186 65.6
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 7.0e-63 245.0 208 56.2
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 7.7e-62 241.5 214 59.3
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 8.5e-61 238.0 198 59.6
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.5e-60 237.3 184 67.9
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 3.2e-60 236.1 237 66.2
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 6.7e-58 228.4 176 64.8
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.2e-57 227.6 170 67.1
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.5e-57 227.3 202 56.4
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 2.6e-57 226.5 181 62.4
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 9.7e-57 224.6 201 53.2
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 4.5e-54 215.7 231 51.5
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 2.5e-52 209.9 174 64.4
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 1.6e-51 207.2 173 59.5
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.7e-51 205.7 202 52.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.6e-46 190.7 194 47.9
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 8.6e-45 184.9 173 54.3
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 1.1e-44 184.5 167 53.3
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 2.3e-42 176.8 125 71.2
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 4.0e-42 176.0 202 45.0
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 6.8e-42 175.3 119 73.1
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.2e-41 174.5 138 65.2
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 6.3e-40 168.7 198 44.4
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 3.1e-39 166.4 231 47.2
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 3.8e-37 159.5 93 79.6
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 6.6e-37 158.7 95 74.7
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 8.6e-37 158.3 93 79.6
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.5e-36 157.5 259 42.5
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.3e-36 156.4 120 66.7
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 6.1e-35 152.1 195 42.6
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.4e-34 151.0 219 42.0
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 5.2e-34 149.1 173 43.4
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 6.6e-29 132.1 120 60.0
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 2.5e-28 130.2 90 67.8
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 4.7e-27 125.9 155 45.8
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 8.0e-27 125.2 219 37.0
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 5.8e-25 119.0 94 61.7
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 4.1e-23 112.8 82 62.2
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 3.3e-20 103.2 136 49.3
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 1.6e-19 100.9 61 73.8
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 9.9e-09 65.1 52 57.7
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 6.4e-08 62.4 91 37.4
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 1.4e-07 61.2 51 52.9
BcaC01g05263 Brassica carinata HOM05D006222 ORTHO05D007677 2.7e-06 57.0 43 60.5


User provided reference genes

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