Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 2.2e-42 175.3 89 100.0
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 3.5e-32 141.4 89 83.1
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 7.2e-30 133.7 91 73.6
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 6.1e-29 130.6 88 76.1
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 4.0e-28 127.9 87 75.9
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 5.2e-28 127.5 86 74.4
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 8.8e-28 126.7 89 73.0
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 1.2e-27 126.3 92 70.7
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.5e-27 125.9 87 73.6
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.5e-27 125.9 89 73.0
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 4.4e-27 124.4 95 72.6
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 5.7e-27 124.0 89 70.8
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 7.5e-27 123.6 89 71.9
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 7.5e-27 123.6 92 67.4
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.3e-26 122.9 89 70.8
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.3e-26 122.9 85 71.8
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.3e-26 122.9 90 71.1
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.7e-26 122.5 86 73.3
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.7e-26 122.5 100 66.0
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.2e-26 122.1 92 68.5
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.8e-26 121.7 98 64.3
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 3.7e-26 121.3 87 73.6
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 4.8e-26 120.9 99 66.7
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 8.3e-26 120.2 88 72.7
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 1.1e-25 119.8 86 68.6
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.1e-25 119.8 87 72.4
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.1e-25 119.8 89 69.7
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.4e-25 119.4 86 72.1
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.4e-25 119.4 93 65.6
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.4e-25 119.4 89 70.8
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.4e-25 119.4 89 70.8
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.8e-25 119.0 87 70.1
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.8e-25 119.0 91 72.5
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.1e-25 117.9 89 67.4
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.3e-25 117.5 89 67.4
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 7.0e-25 117.1 95 65.3
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 9.1e-25 116.7 92 67.4
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 9.1e-25 116.7 94 70.2
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 1.6e-24 115.9 93 63.4
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.6e-24 115.9 89 66.3
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.6e-24 115.9 89 66.3
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 2.0e-24 115.5 87 70.1
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 3.5e-24 114.8 92 66.3
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 3.5e-24 114.8 96 65.6
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 5.9e-24 114.0 91 68.1
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 7.7e-24 113.6 90 70.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.0e-23 113.2 87 70.1
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 1.7e-23 112.5 93 64.5
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 1.7e-23 112.5 97 60.8
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.7e-23 112.5 86 68.6
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.7e-23 112.5 86 68.6
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 2.2e-23 112.1 93 64.5
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 2.2e-23 112.1 85 71.8
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.8e-23 111.3 96 63.5
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.8e-23 111.3 82 70.7
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 3.8e-23 111.3 100 61.0
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 6.5e-23 110.5 96 63.5
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 8.5e-23 110.2 100 64.0
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 8.5e-23 110.2 96 63.5
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.5e-22 109.4 88 68.2
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 1.5e-22 109.4 94 64.9
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.5e-22 109.4 90 66.7
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 3.2e-22 108.2 95 62.1
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 3.2e-22 108.2 97 60.8
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 3.2e-22 108.2 95 62.1
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 3.2e-22 108.2 97 60.8
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 4.2e-22 107.8 92 65.2
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 4.2e-22 107.8 88 67.0
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 5.5e-22 107.5 95 62.1
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 9.4e-22 106.7 95 62.1
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 9.4e-22 106.7 84 65.5
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 1.6e-21 105.9 89 64.0
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.6e-21 105.9 88 64.8
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 4.7e-21 104.4 87 64.4
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 6.1e-21 104.0 87 65.5
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.8e-20 102.4 57 84.2
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 2.3e-20 102.1 86 64.0
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 3.0e-20 101.7 89 59.6
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 5.2e-20 100.9 92 62.0
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 5.2e-20 100.9 90 61.1
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 5.2e-20 100.9 77 70.1
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.8e-20 100.5 92 57.6
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 6.8e-20 100.5 92 57.6
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 8.8e-20 100.1 76 67.1
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 8.8e-20 100.1 54 81.5
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 8.8e-20 100.1 75 70.7
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 1.2e-19 99.8 74 70.3
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.5e-19 99.4 73 69.9
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 2.0e-19 99.0 77 68.8
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 5.7e-19 97.4 87 58.6
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 8.3e-18 93.6 99 56.6
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 1.8e-17 92.4 78 64.1
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 3.1e-17 91.7 72 68.1
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 3.1e-17 91.7 82 64.6
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 3.1e-17 91.7 72 66.7
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 7.0e-17 90.5 85 58.8
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 7.0e-17 90.5 80 63.8
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.3e-15 86.3 81 63.0
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.7e-15 85.9 77 59.7
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 3.8e-15 84.7 71 63.4
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.5e-14 82.8 43 93.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 4.2e-14 81.3 78 57.7
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 9.5e-14 80.1 82 53.7
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.1e-13 79.0 50 82.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 2.1e-13 79.0 43 88.4
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.6e-13 78.2 74 58.1
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 6.1e-13 77.4 80 55.0
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.8e-12 75.9 75 57.3
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 4.0e-12 74.7 41 78.0
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.0e-08 62.4 39 84.6
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.0e-08 62.4 39 84.6


User provided reference genes

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