Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 3.2e-37 157.9 81 100.0
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 8.9e-27 123.2 78 79.5
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 3.4e-26 121.3 82 80.5
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 1.3e-25 119.4 78 78.2
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 1.3e-25 119.4 81 76.5
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 3.7e-25 117.9 78 78.2
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 3.7e-25 117.9 77 77.9
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 3.7e-25 117.9 80 75.0
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 6.4e-25 117.1 78 76.9
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 6.4e-25 117.1 78 74.4
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 8.3e-25 116.7 78 76.9
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 74.4
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 78.2
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 78.2
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 78.2
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 1.8e-24 115.5 78 74.4
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 3.2e-24 114.8 78 73.1
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 3.2e-24 114.8 78 73.1
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 3.2e-24 114.8 78 73.1
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 3.2e-24 114.8 78 73.1
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 5.4e-24 114.0 77 76.6
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 7.0e-24 113.6 77 75.3
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 9.2e-24 113.2 78 73.1
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 9.2e-24 113.2 78 73.1
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 9.2e-24 113.2 77 76.6
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 1.6e-23 112.5 79 74.7
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 1.6e-23 112.5 78 73.1
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 2.0e-23 112.1 78 73.1
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 2.0e-23 112.1 78 73.1
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 2.7e-23 111.7 78 71.8
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 2.7e-23 111.7 78 74.4
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 3.5e-23 111.3 78 70.5
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 3.5e-23 111.3 78 71.8
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 3.5e-23 111.3 78 71.8
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 4.6e-23 110.9 78 71.8
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 4.6e-23 110.9 78 71.8
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 4.6e-23 110.9 77 74.0
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 7.8e-23 110.2 78 71.8
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 1.3e-22 109.4 77 70.1
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.3e-22 108.6 79 70.9
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 2.3e-22 108.6 73 78.1
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 3.9e-22 107.8 79 70.9
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 5.0e-22 107.5 80 67.5
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 8.6e-22 106.7 78 67.9
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.1e-21 106.3 78 69.2
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.5e-21 105.9 77 71.4
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 1.5e-21 105.9 78 70.5
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.3e-21 104.4 78 67.9
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 5.6e-21 104.0 82 70.7
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 7.3e-21 103.6 79 67.1
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 8.0e-20 100.1 79 67.1
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 8.0e-20 100.1 86 68.6
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.4e-19 99.4 80 71.2
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 2.3e-19 98.6 75 72.0
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 3.1e-19 98.2 79 69.6
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 3.1e-19 98.2 80 66.2
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 4.0e-19 97.8 80 71.2
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 6.8e-19 97.1 89 60.7
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.8e-19 97.1 79 64.6
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 6.8e-19 97.1 79 64.6
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.8e-19 97.1 81 66.7
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.8e-19 97.1 81 66.7
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 8.9e-19 96.7 79 69.6
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 1.5e-18 95.9 78 65.4
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.0e-18 95.5 79 62.0
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 2.0e-18 95.5 76 69.7
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.0e-18 95.5 79 65.8
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 2.0e-18 95.5 79 68.4
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 3.4e-18 94.7 67 70.1
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.4e-18 94.4 79 68.4
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.8e-18 94.0 79 60.8
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.8e-18 94.0 79 60.8
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 7.5e-18 93.6 79 62.0
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 9.8e-18 93.2 79 67.1
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.8e-18 93.2 79 60.8
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.3e-17 92.8 79 59.5
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 1.7e-17 92.4 82 68.3
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 1.7e-17 92.4 82 68.3
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 2.2e-17 92.0 79 63.3
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.9e-17 91.7 79 59.5
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.9e-17 91.7 79 59.5
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 3.7e-17 91.3 79 65.8
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.9e-17 90.9 79 59.5
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 4.9e-17 90.9 79 63.3
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 6.4e-17 90.5 80 62.5
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 6.4e-17 90.5 79 65.8
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 8.3e-17 90.1 82 67.1
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 1.9e-16 89.0 88 58.0
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 7.0e-16 87.0 92 57.6
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 9.2e-16 86.7 88 55.7
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 1.6e-15 85.9 78 61.5
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 1.6e-15 85.9 63 73.0
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 6.0e-15 84.0 71 62.0
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 1.3e-14 82.8 89 58.4
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 1.5e-13 79.3 65 70.8
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.5e-13 78.6 90 56.7
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 4.3e-13 77.8 95 51.6
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 5.6e-13 77.4 81 58.0
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 7.1e-08 60.5 83 48.2
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 3.5e-07 58.2 42 64.3
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 3.0e-06 55.1 49 59.2
Pp3c2_29500 Physcomitrium patens HOM05D007547 ORTHO05D009590 8.6e-06 53.5 84 48.8


User provided reference genes

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