Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G076151 Manihot esculenta HOM05D000429 ORTHO05D000352 1.4e-113 412.9 208 100.0
Manes.18G145610 Manihot esculenta HOM05D000429 ORTHO05D000352 3.1e-55 219.2 206 57.3
Manes.13G092290 Manihot esculenta HOM05D000429 ORTHO05D000352 7.0e-52 208.0 180 62.8
Manes.13G092480 Manihot esculenta HOM05D000429 ORTHO05D000352 2.4e-44 183.0 158 63.3
Manes.16G047550 Manihot esculenta HOM05D000429 ORTHO05D000352 2.7e-43 179.5 234 47.0
Manes.16G049870 Manihot esculenta HOM05D000429 ORTHO05D000352 2.1e-40 169.9 163 57.1
Manes.04G060101 Manihot esculenta HOM05D000429 ORTHO05D000352 6.2e-40 168.3 152 61.8
Manes.01G082850 Manihot esculenta HOM05D000429 ORTHO05D000352 5.4e-36 155.2 154 55.8
Manes.05G115092 Manihot esculenta HOM05D000429 ORTHO05D000352 2.7e-35 152.9 192 51.0
Manes.15G107550 Manihot esculenta HOM05D000429 ORTHO05D000352 2.3e-34 149.8 136 58.1
Manes.07G030402 Manihot esculenta HOM05D000429 ORTHO05D000352 3.9e-34 149.1 125 67.2
Manes.18G141017 Manihot esculenta HOM05D000429 ORTHO05D000352 3.3e-33 146.0 134 62.7
Manes.18G146801 Manihot esculenta HOM05D000429 ORTHO05D000352 3.3e-33 146.0 134 59.0
Manes.05G115333 Manihot esculenta HOM05D000429 ORTHO05D000352 4.2e-28 129.0 220 42.3
Manes.13G077768 Manihot esculenta HOM05D000429 ORTHO05D000352 7.8e-27 124.8 118 58.5
Manes.09G078108 Manihot esculenta HOM05D000429 ORTHO05D000352 3.9e-26 122.5 225 37.3
Manes.11G095280 Manihot esculenta HOM05D000429 ORTHO05D000352 3.5e-19 99.4 197 31.5
Oeu004063.1 Olea europaea HOM05D000429 ORTHO05D000352 2.4e-15 86.7 274 25.5
Oeu033492.1 Olea europaea HOM05D000047 ORTHO05D008058 5.3e-15 85.5 281 26.7
Oeu033810.1 Olea europaea HOM05D000429 ORTHO05D000352 5.3e-15 85.5 280 27.5
Oeu037482.1 Olea europaea HOM05D000429 ORTHO05D000352 6.9e-15 85.1 280 27.5
Oeu033863.1 Olea europaea HOM05D000429 ORTHO05D000352 1.2e-14 84.3 274 26.3
Oeu064652.1 Olea europaea HOM05D000429 ORTHO05D000352 2.6e-14 83.2 280 26.8
Oeu058894.1 Olea europaea HOM05D000047 ORTHO05D008058 4.5e-14 82.4 280 26.8
Oeu064691.1 Olea europaea HOM05D000429 ORTHO05D000352 5.8e-14 82.0 274 25.9
Manes.16G059350 Manihot esculenta HOM05D000429 ORTHO05D000352 7.6e-14 81.6 71 62.0
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 4.9e-13 79.0 283 26.5
Oeu038088.4 Olea europaea HOM05D000429 ORTHO05D000352 1.1e-12 77.8 280 26.4
QL05p012956 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-12 77.4 283 26.5
QL08p065228 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-12 77.4 283 26.5
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 1.4e-12 77.4 283 28.3
Manes.10G105750 Manihot esculenta HOM05D000429 ORTHO05D000352 2.4e-12 76.6 169 33.7
CSS0043325 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 3.2e-12 76.3 137 35.0
PSO017G3887 Papaver somniferum HOM05D000429 ORTHO05D000352 4.2e-12 75.9 233 27.5
CSS0008580 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 5.4e-12 75.5 180 31.1
CSS0002712 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.1e-12 75.1 189 31.2
CSS0028604 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.1e-12 75.1 149 32.9
CSS0046711 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 7.1e-12 75.1 149 32.9
CANSAT11G1830 Cannabis sativa HOM05D000429 ORTHO05D000352 9.3e-12 74.7 177 34.5
CSS0021795 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.2e-11 74.3 132 34.1
Oeu057937.1 Olea europaea HOM05D000429 ORTHO05D000352 1.6e-11 73.9 252 25.0
Manes.02G203175 Manihot esculenta HOM05D000429 ORTHO05D000352 2.1e-11 73.6 276 26.1
Oeu044645.1 Olea europaea HOM05D000429 ORTHO05D000352 2.1e-11 73.6 281 25.6
Oeu014370.1 Olea europaea HOM05D000429 ORTHO05D000352 3.5e-11 72.8 269 26.4
Oeu043216.1 Olea europaea HOM05D000429 ORTHO05D000352 3.5e-11 72.8 252 25.0
CSS0014631 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.0e-11 72.0 132 33.3
CSS0029853 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.0e-11 72.0 149 32.2
CSS0043404 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.0e-11 72.0 149 32.2
vmacro12124 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 1.0e-10 71.2 127 33.9
Os03g0439900 Oryza sativa ssp. japonica HOM05D000429 ORTHO05D000352 1.3e-10 70.9 151 31.1
CSS0037010 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.3e-10 70.1 138 31.9
CANSAT11G0599 Cannabis sativa HOM05D000429 ORTHO05D000352 2.3e-10 70.1 177 34.5
PSO782G3664 Papaver somniferum HOM05D000429 ORTHO05D000352 3.0e-10 69.7 216 27.3
CSS0025671 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.7e-10 68.6 137 33.6
Manes.07G072438 Manihot esculenta HOM05D000429 ORTHO05D000352 1.1e-09 67.8 131 32.8
Manes.16G015332 Manihot esculenta HOM05D000429 ORTHO05D000352 1.1e-09 67.8 169 30.8
Oeu045230.1 Olea europaea HOM05D000047 ORTHO05D000044 1.1e-09 67.8 138 31.9
PSO063G5078 Papaver somniferum HOM05D000429 ORTHO05D000352 1.1e-09 67.8 261 23.4
PSO832G3391 Papaver somniferum HOM05D000429 ORTHO05D000352 1.1e-09 67.8 280 24.6
BolC7t42999H Brassica oleracea HOM05D000429 ORTHO05D000352 1.5e-09 67.4 127 31.5
Oeu010062.1 Olea europaea HOM05D000429 ORTHO05D000352 1.5e-09 67.4 246 26.4
AUR62042050 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.3e-09 66.2 140 30.7
arahy.Tifrunner.gnm1.ann1.UC2LFY Arachis hypogaea HOM05D000429 ORTHO05D000352 4.3e-09 65.9 131 29.8
CANSAT25G2129 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-09 65.9 150 34.0
CANSAT56G4516 Cannabis sativa HOM05D000429 ORTHO05D000352 4.3e-09 65.9 239 27.2
ECA236G3431 Erigeron canadensis HOM05D000047 ORTHO05D000044 4.3e-09 65.9 260 23.8
vmacro12970 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 4.3e-09 65.9 127 32.3
PSO832G4394 Papaver somniferum HOM05D000429 ORTHO05D000352 5.6e-09 65.5 266 24.8
PSO170G0352 Papaver somniferum HOM05D000429 ORTHO05D000352 7.4e-09 65.1 252 24.6
AUR62013405 Chenopodium quinoa HOM05D000429 ORTHO05D000352 9.6e-09 64.7 184 28.3
PSO832G0303 Papaver somniferum HOM05D000429 ORTHO05D000352 1.3e-08 64.3 212 25.5
TWI77G0502 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.6e-08 63.9 127 32.3
arahy.Tifrunner.gnm1.ann1.E3E3WX Arachis hypogaea HOM05D000429 ORTHO05D000352 2.1e-08 63.5 172 27.3
CANSAT35G1116 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-08 63.5 180 29.4
CANSAT78G0316 Cannabis sativa HOM05D000429 ORTHO05D000352 2.1e-08 63.5 150 32.7
AUR62004864 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.1e-08 63.5 140 30.0
PSO170G2019 Papaver somniferum HOM05D000429 ORTHO05D000352 2.1e-08 63.5 256 25.0
QL07p045945 Quercus lobata HOM05D000047 ORTHO05D000044 2.1e-08 63.5 271 23.6
TWI38G1677 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 2.1e-08 63.5 127 32.3
CANSAT35G1271 Cannabis sativa HOM05D000429 ORTHO05D000352 2.8e-08 63.2 136 29.4
PSO063G4892 Papaver somniferum HOM05D000429 ORTHO05D000352 2.8e-08 63.2 262 23.7
PSO170G3886 Papaver somniferum HOM05D000429 ORTHO05D000352 2.8e-08 63.2 242 23.1
AUR62032694 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.7e-08 62.8 110 33.6
AUR62035460 Chenopodium quinoa HOM05D000429 ORTHO05D000352 3.7e-08 62.8 117 32.5
PSO170G2783 Papaver somniferum HOM05D000429 ORTHO05D000352 3.7e-08 62.8 241 24.1
CANSAT11G2636 Cannabis sativa HOM05D000429 ORTHO05D000352 6.2e-08 62.0 180 29.4
PSO761G0467 Papaver somniferum HOM05D000429 ORTHO05D000352 6.2e-08 62.0 140 30.7
arahy.Tifrunner.gnm1.ann1.99K3J2 Arachis hypogaea HOM05D000047 ORTHO05D000044 8.1e-08 61.6 275 22.5
CSS0027013 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 8.1e-08 61.6 126 32.5
Sed0025965 Sechium edule HOM05D000429 ORTHO05D008058 8.1e-08 61.6 158 30.4
CSS0013021 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.1e-07 61.2 129 31.8
ECA232G4548 Erigeron canadensis HOM05D000047 ORTHO05D000352 1.1e-07 61.2 127 29.1
TAR012G0002 Trochodendron aralioides HOM05D000429 ORTHO05D000352 1.1e-07 61.2 94 39.4
arahy.Tifrunner.gnm1.ann1.W6UN1E Arachis hypogaea HOM05D003069 ORTHO05D000880 1.4e-07 60.8 84 38.1
CANSAT54G1627 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-07 60.8 179 27.9
CANSAT64G0185 Cannabis sativa HOM05D000429 ORTHO05D000352 1.4e-07 60.8 177 27.7
CANSAT35G1307 Cannabis sativa HOM05D000429 ORTHO05D000352 1.8e-07 60.5 271 23.2
Oeu022243.3 Olea europaea HOM05D002556 ORTHO05D003153 1.8e-07 60.5 203 27.1
CSS0011394 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.4e-07 60.1 116 31.9
AUR62044001 Chenopodium quinoa HOM05D000429 ORTHO05D000352 2.4e-07 60.1 185 27.0
PSO832G0355 Papaver somniferum HOM05D000429 ORTHO05D000352 2.4e-07 60.1 273 23.8
CSS0024310 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 3.1e-07 59.7 129 31.0
CANSAT01G2744 Cannabis sativa HOM05D000429 ORTHO05D000352 3.1e-07 59.7 177 29.4
PSO063G5738 Papaver somniferum HOM05D000429 ORTHO05D000352 3.1e-07 59.7 129 29.5
Potri.006G157801 Populus trichocarpa HOM05D000429 ORTHO05D000352 3.1e-07 59.7 119 28.6
TWI59G1479 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.1e-07 59.7 126 30.2
CSS0043892 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 4.0e-07 59.3 127 31.5
CANSAT25G3712 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-07 59.3 140 32.9
CANSAT80G0962 Cannabis sativa HOM05D000429 ORTHO05D000352 4.0e-07 59.3 163 30.1
vmacro22797 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 4.0e-07 59.3 124 30.6
AUR62024547 Chenopodium quinoa HOM05D000429 ORTHO05D000352 5.3e-07 58.9 140 32.1
MBI05_g19268_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D008058 5.3e-07 58.9 239 23.0
TWI14G1011 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.3e-07 58.9 277 23.1
TWI63G0605 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.3e-07 58.9 127 29.1
CSS0044602 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 6.9e-07 58.5 126 31.7
CANSAT54G1303 Cannabis sativa HOM05D001646 ORTHO05D001572 6.9e-07 58.5 125 32.8
AUR62040874 Chenopodium quinoa HOM05D000429 ORTHO05D000352 6.9e-07 58.5 122 32.0
CSS0025589 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 9.0e-07 58.2 119 31.1
AUR62002668 Chenopodium quinoa HOM05D000429 ORTHO05D000352 9.0e-07 58.2 122 32.8
PSO782G2121 Papaver somniferum HOM05D000429 ORTHO05D000352 9.0e-07 58.2 262 24.0
CSS0010738 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 1.2e-06 57.8 116 31.0
CANSAT25G3092 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-06 57.8 163 31.3
CANSAT56G4150 Cannabis sativa HOM05D000429 ORTHO05D000352 1.2e-06 57.8 181 27.6
HanXRQChr10g0279851 Helianthus annuus HOM05D000047 ORTHO05D000044 1.2e-06 57.8 281 24.2
PSO339G5883 Papaver somniferum HOM05D000429 ORTHO05D000352 1.2e-06 57.8 128 28.9
PSO761G0393 Papaver somniferum HOM05D000429 ORTHO05D000352 1.2e-06 57.8 256 25.0
CANSAT78G2313 Cannabis sativa HOM05D000429 ORTHO05D000352 1.5e-06 57.4 169 28.4
TWI18G0773 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 1.5e-06 57.4 266 25.2
CANSAT71G0013 Cannabis sativa HOM05D000429 ORTHO05D000352 2.0e-06 57.0 136 29.4
AUR62022263 Chenopodium quinoa HOM05D008320 ORTHO05D000352 2.0e-06 57.0 114 31.6
ECA247G2301 Erigeron canadensis HOM05D000006 ORTHO05D000044 2.0e-06 57.0 245 22.9
CSS0016775 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 2.6e-06 56.6 157 29.9
CANSAT54G0136 Cannabis sativa HOM05D000429 ORTHO05D000352 2.6e-06 56.6 170 29.4
PSO357G0200 Papaver somniferum HOM05D000429 ORTHO05D000352 2.6e-06 56.6 198 25.8
BcaC07g38208 Brassica carinata HOM05D000429 ORTHO05D000352 3.4e-06 56.2 127 29.9
CANSAT78G2291 Cannabis sativa HOM05D000429 ORTHO05D000352 3.4e-06 56.2 223 25.6
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 3.4e-06 56.2 152 30.9
TWI09G1400 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 3.4e-06 56.2 256 25.4
AUR62021090 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.5e-06 55.8 114 31.6
AUR62034884 Chenopodium quinoa HOM05D000429 ORTHO05D000352 4.5e-06 55.8 117 29.9
PSO210G6353 Papaver somniferum HOM05D000429 ORTHO05D000352 4.5e-06 55.8 241 24.1
PSO509G0034 Papaver somniferum HOM05D000429 ORTHO05D000352 4.5e-06 55.8 251 22.7
PSO675G1707 Papaver somniferum HOM05D000429 ORTHO05D000352 4.5e-06 55.8 128 28.1
PSO832G1809 Papaver somniferum HOM05D000429 ORTHO05D000352 4.5e-06 55.8 128 28.1
Rhsim04G0229300 Rhododendron simsii HOM05D000429 ORTHO05D000352 4.5e-06 55.8 192 29.2
TWI31G0293 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 4.5e-06 55.8 130 30.8
TWI39G0904 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.5e-06 55.8 127 29.9
TWI73G1087 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 4.5e-06 55.8 273 24.9
CSS0007125 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-06 55.5 128 28.1
CSS0031443 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-06 55.5 128 28.1
CSS0037882 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 5.8e-06 55.5 128 28.1
CANSAT21G1062 Cannabis sativa HOM05D000429 ORTHO05D000352 5.8e-06 55.5 218 25.7
CANSAT54G2683 Cannabis sativa HOM05D000429 ORTHO05D000352 5.8e-06 55.5 180 26.7
CANSAT80G0915 Cannabis sativa HOM05D000047 ORTHO05D000044 5.8e-06 55.5 134 33.6
TWI09G1035 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.8e-06 55.5 274 23.4
TWI23G0324 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.8e-06 55.5 274 23.4
TWI36G0915 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.8e-06 55.5 274 23.4
TWI36G1698 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.8e-06 55.5 274 23.4
TWI38G0623 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 5.8e-06 55.5 274 23.4
Ah.01g016560 Amaranthus hybridus HOM05D016717 ORTHO05D000352 7.6e-06 55.1 125 30.4
Ah.01g016570 Amaranthus hybridus HOM05D016717 ORTHO05D000352 7.6e-06 55.1 125 30.4
CSS0001713 Camellia sinensis var. sinensis HOM05D000429 ORTHO05D000352 7.6e-06 55.1 128 28.1
CANSAT21G2111 Cannabis sativa HOM05D008422 ORTHO05D000352 7.6e-06 55.1 131 29.8
CANSAT35G1950 Cannabis sativa HOM05D000429 ORTHO05D000352 7.6e-06 55.1 149 30.2
CANSAT64G1649 Cannabis sativa HOM05D000429 ORTHO05D000352 7.6e-06 55.1 180 28.3
ECA247G3812 Erigeron canadensis HOM05D000429 ORTHO05D000352 7.6e-06 55.1 127 27.6
TWI14G0816 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 274 23.7
TWI31G0564 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 130 31.5
TWI38G1491 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 277 22.7
TWI77G0286 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 274 23.0
TWI77G0325 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 274 23.0
TWI77G0384 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 7.6e-06 55.1 257 22.6
AUR62023870 Chenopodium quinoa HOM05D000429 ORTHO05D000352 9.9e-06 54.7 114 33.3
MBI08_g16120_MAGBIO Magnolia biondii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 112 33.9
PSO170G1181 Papaver somniferum HOM05D000429 ORTHO05D000352 9.9e-06 54.7 120 31.7
PSO675G4485 Papaver somniferum HOM05D000429 ORTHO05D000352 9.9e-06 54.7 128 28.1
PSO700G0227 Papaver somniferum HOM05D000429 ORTHO05D000352 9.9e-06 54.7 153 28.8
Rhsim03G0108800 Rhododendron simsii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 129 33.3
TWI15G0819 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 277 23.8
TWI34G1795 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 104 32.7
TWI38G1293 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 277 23.8
TWI39G1108 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 228 22.8
TWI73G1041 Tripterygium wilfordii HOM05D000429 ORTHO05D000352 9.9e-06 54.7 277 23.8


User provided reference genes

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