Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G072833 Manihot esculenta HOM05D003164 ORTHO05D249562 2.4e-38 161.8 87 100.0
Manes.13G082278 Manihot esculenta HOM05D003164 ORTHO05D251042 7.0e-38 160.2 87 98.9
Manes.18G058800 Manihot esculenta HOM05D000108 ORTHO05D001407 1.5e-11 72.8 56 80.4
Atru.chr13.1012 Acer truncatum HOM05D000108 ORTHO05D001407 2.2e-07 58.9 46 71.7
Cfa013795 Carpinus fangiana HOM05D000108 ORTHO05D001407 2.2e-07 58.9 43 74.4
Haze_22458 Corylus avellana HOM05D000108 ORTHO05D001407 2.2e-07 58.9 43 74.4
CiPaw.07G165600 Carya illinoinensis HOM05D000108 ORTHO05D001407 4.9e-07 57.8 56 58.9
Sabra02G0083300 Salix brachista HOM05D000108 ORTHO05D001407 6.4e-07 57.4 43 74.4
arahy.Tifrunner.gnm1.ann1.2IJU75 Arachis hypogaea HOM05D000108 ORTHO05D001407 8.4e-07 57.0 43 72.1
Cpa.g.sc21.19 Carica papaya HOM05D000108 ORTHO05D001407 8.4e-07 57.0 50 66.0
Potri.002G106000 Populus trichocarpa HOM05D000108 ORTHO05D001407 1.1e-06 56.6 43 74.4
TPR.G6308 Trifolium pratense HOM05D000108 ORTHO05D001407 1.1e-06 56.6 43 69.8
Gohir.A11G237400 Gossypium hirsutum HOM05D003164 ORTHO05D003575 1.9e-06 55.8 27 92.6
Gohir.D11G247800 Gossypium hirsutum HOM05D003164 ORTHO05D003575 1.9e-06 55.8 27 92.6
Gorai.007G264200 Gossypium raimondii HOM05D003164 ORTHO05D003575 1.9e-06 55.8 27 92.6
Actinidia19818 Actinidia chinensis HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Cfa006502 Carpinus fangiana HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Ca_23442_v3 Cicer arietinum L. HOM05D000108 ORTHO05D001407 2.4e-06 55.5 43 67.4
Haze_04286 Corylus avellana HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Dinv26584 Davidia involucrata HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Dinv42614 Davidia involucrata HOM05D000108 ORTHO05D001407 2.4e-06 55.5 42 76.2
Duzib177G0106 Durio zibethinus HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Lj1g0007620 Lotus japonicus HOM05D000108 ORTHO05D001407 2.4e-06 55.5 43 69.8
MD00G1051800 Malus domestica HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Manes.09G160300 Manihot esculenta HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Potri.005G150800 Populus trichocarpa HOM05D000108 ORTHO05D001407 2.4e-06 55.5 62 58.1
Prupe.6G335200 Prunus persica HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
Rhsim05G0148300 Rhododendron simsii HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
vmacro19661 Vaccinium macrocarpon HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
GSVIVG01021968001 Vitis vinifera HOM05D003164 ORTHO05D003575 2.4e-06 55.5 27 92.6
COL.COLO4_36045 Corchorus olitorius HOM05D003164 ORTHO05D003575 3.2e-06 55.1 26 92.3
Eucgr.F00421 Eucalyptus grandis HOM05D000108 ORTHO05D001407 4.2e-06 54.7 56 58.9
Glyma.02G214300 Glycine max HOM05D000108 ORTHO05D001407 4.2e-06 54.7 43 67.4
Glyma.14G181800 Glycine max HOM05D000108 ORTHO05D001407 4.2e-06 54.7 43 67.4
VMungo0647G1798 Vigna mungo HOM05D000108 ORTHO05D001407 4.2e-06 54.7 43 67.4
CiPaw.07G011200 Carya illinoinensis HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FvH4_6g04200 Fragaria vesca HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FAN02G3711 Fragaria x ananassa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FAN05G0476 Fragaria x ananassa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FAN05G2991 Fragaria x ananassa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FAN09G1513 Fragaria x ananassa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
FAN14G0559 Fragaria x ananassa HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
Gohir.D08G136900 Gossypium hirsutum HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
Lj9A675G47 Lonicera japonica HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
Nitab4.5_0001165g0150 Nicotiana tabacum HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
PSO017G0225 Papaver somniferum HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
PSO478G0868 Papaver somniferum HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
RcHm_v2.0_Chr3g0452881 Rosa chinensis HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
Thecc.08G070900 Theobroma cacao HOM05D000108 ORTHO05D001407 5.4e-06 54.3 50 64.0
TAR629G0113 Trochodendron aralioides HOM05D003164 ORTHO05D003575 5.4e-06 54.3 27 88.9
Duzib106G1424 Durio zibethinus HOM05D003164 ORTHO05D003575 7.1e-06 53.9 27 88.9
FAN09G4779 Fragaria x ananassa HOM05D003164 ORTHO05D003575 7.1e-06 53.9 26 88.5
Phvul.008G181800 Phaseolus vulgaris HOM05D000108 ORTHO05D001407 7.1e-06 53.9 43 67.4
Thecc.05G252700 Theobroma cacao HOM05D003164 ORTHO05D003575 7.1e-06 53.9 27 88.9
ClCG11G014560 Citrullus lanatus HOM05D000108 ORTHO05D001407 9.3e-06 53.5 42 69.0
CsaV3_3G047980 Cucumis sativus L. HOM05D000108 ORTHO05D001407 9.3e-06 53.5 43 65.1
Duzib116G0269 Durio zibethinus HOM05D000108 ORTHO05D001407 9.3e-06 53.5 40 77.5
Medtr3g100270 Medicago truncatula HOM05D000108 ORTHO05D001407 9.3e-06 53.5 43 65.1
Oeu061173.1 Olea europaea HOM05D000108 ORTHO05D001407 9.3e-06 53.5 42 73.8
QL03p000954 Quercus lobata HOM05D003164 ORTHO05D003575 9.3e-06 53.5 26 88.5
QL09p017790 Quercus lobata HOM05D000108 ORTHO05D001407 9.3e-06 53.5 42 73.8
SHI20346 Sapria himalayana HOM05D000108 ORTHO05D001407 9.3e-06 53.5 47 70.2


User provided reference genes

Program Settings