Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 4.6e-74 281.2 146 100.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 1.6e-50 203.0 116 91.4
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 3.5e-50 201.8 113 92.0
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.0e-49 200.3 113 91.2
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.3e-49 199.9 113 92.0
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 5.1e-49 198.0 113 90.3
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 6.7e-49 197.6 113 91.2
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 6.7e-49 197.6 113 92.0
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.1e-48 196.8 113 88.5
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.5e-48 196.4 113 90.3
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 2.5e-48 195.7 113 87.6
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 3.3e-48 195.3 113 87.6
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 3.3e-48 195.3 113 86.7
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 3.3e-48 195.3 112 90.2
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 3.3e-48 195.3 113 90.3
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 4.3e-48 194.9 113 86.7
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 5.6e-48 194.5 112 88.4
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.6e-48 194.5 112 89.3
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 5.6e-48 194.5 112 89.3
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 5.6e-48 194.5 111 91.9
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 9.6e-48 193.7 113 87.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 9.6e-48 193.7 113 90.3
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 1.3e-47 193.4 113 85.8
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 1.3e-47 193.4 113 90.3
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.3e-47 193.4 112 88.4
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.3e-47 193.4 111 91.0
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.3e-47 193.4 113 86.7
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.6e-47 193.0 108 90.7
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 1.6e-47 193.0 113 87.6
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 1.6e-47 193.0 113 87.6
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.8e-47 192.2 112 89.3
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.8e-47 192.2 112 88.4
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 2.8e-47 192.2 113 88.5
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 2.8e-47 192.2 111 89.2
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 2.8e-47 192.2 108 90.7
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 3.7e-47 191.8 108 90.7
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 3.7e-47 191.8 111 88.3
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 3.7e-47 191.8 113 87.6
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 4.8e-47 191.4 111 90.1
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 4.8e-47 191.4 113 87.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 4.8e-47 191.4 111 89.2
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 4.8e-47 191.4 113 85.8
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 8.2e-47 190.7 113 84.1
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 8.2e-47 190.7 109 89.9
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 8.2e-47 190.7 111 88.3
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 1.1e-46 190.3 128 80.5
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-46 190.3 108 90.7
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 1.4e-46 189.9 113 87.6
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.4e-46 189.9 111 88.3
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.4e-46 189.9 109 89.9
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.8e-46 189.5 113 86.7
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 1.8e-46 189.5 107 92.5
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 2.4e-46 189.1 113 85.8
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 2.4e-46 189.1 113 86.7
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 3.1e-46 188.7 111 86.5
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 3.1e-46 188.7 111 87.4
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.1e-46 188.7 112 87.5
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 3.1e-46 188.7 113 86.7
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 4.0e-46 188.3 111 85.6
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.0e-46 188.3 113 86.7
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.0e-46 188.3 112 87.5
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 4.0e-46 188.3 108 88.9
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.3e-46 188.0 112 86.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 5.3e-46 188.0 112 85.7
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 5.3e-46 188.0 113 85.8
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.2e-45 186.8 113 85.0
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.5e-45 186.4 111 83.8
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 1.5e-45 186.4 112 85.7
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.5e-45 186.4 108 88.0
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 4.5e-45 184.9 118 83.1
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.0e-44 183.7 121 81.8
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.0e-44 183.7 111 83.8
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 2.2e-44 182.6 112 82.1
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 2.9e-44 182.2 122 81.1
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 4.9e-44 181.4 121 80.2
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 8.4e-44 180.6 112 81.2
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.1e-43 180.3 113 80.5
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.1e-43 180.3 113 80.5
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.1e-43 180.3 113 80.5
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-43 179.9 112 81.2
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 1.4e-43 179.9 112 81.2
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.9e-43 179.5 113 80.5
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.9e-43 179.5 113 82.3
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 1.9e-43 179.5 113 81.4
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 4.2e-43 178.3 113 79.6
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 4.2e-43 178.3 113 79.6
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.2e-43 178.3 112 84.8
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 4.2e-43 178.3 129 76.0
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.1e-42 176.0 112 83.9
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 2.1e-42 176.0 113 81.4
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.9e-42 174.1 113 77.9
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.0e-41 173.7 113 77.9
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.3e-41 173.3 112 80.4
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.8e-41 172.9 116 77.6
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.1e-40 170.2 126 73.8
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.9e-40 169.5 112 74.1
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 2.8e-39 165.6 108 77.8
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 2.8e-39 165.6 168 57.7
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 8.2e-39 164.1 160 60.0
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 8.2e-39 164.1 92 92.4
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.8e-38 162.9 112 76.8
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 3.1e-38 162.2 92 89.1
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.1e-38 162.2 90 92.2
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 4.1e-38 161.8 92 90.2
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 5.3e-38 161.4 92 89.1
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 9.0e-38 160.6 87 94.3
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.2e-37 160.2 111 73.9
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.0e-37 159.5 90 88.9
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 3.4e-37 158.7 88 89.8
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 5.9e-37 157.9 89 88.8
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.3e-36 156.8 92 90.2
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 1.7e-36 156.4 87 89.7
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 1.7e-36 156.4 86 93.0
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 2.2e-36 156.0 89 89.9
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 3.8e-36 155.2 117 72.6
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 8.5e-36 154.1 110 70.0
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 1.4e-35 153.3 92 84.8
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 4.2e-35 151.8 92 83.7
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 4.2e-35 151.8 87 88.5
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 5.5e-35 151.4 113 75.2
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 9.4e-35 150.6 95 81.1
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 3.6e-34 148.7 121 62.0
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.0e-33 147.1 87 83.9
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 1.8e-33 146.4 115 70.4
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.8e-33 146.4 110 67.3
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 3.9e-33 145.2 118 67.8
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.5e-32 143.3 113 62.8
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.8e-31 138.3 123 65.0
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.1e-30 137.1 90 78.9
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.5e-27 125.9 113 64.6
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.6e-26 123.2 71 87.3
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.6e-26 123.2 69 91.3
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 6.1e-26 121.3 92 71.7
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 6.1e-26 121.3 92 71.7
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 7.9e-26 120.9 70 87.1
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.3e-25 119.4 69 89.9
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 3.9e-25 118.6 186 45.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.0e-24 116.3 88 71.6
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 2.0e-24 116.3 118 60.2
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.4e-24 115.2 77 77.9
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 6.3e-23 111.3 61 91.8
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 4.2e-19 98.6 71 69.0
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 7.2e-19 97.8 64 75.0
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 2.1e-18 96.3 64 73.4
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 3.6e-18 95.5 112 45.5
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 4.7e-18 95.1 67 70.1
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 6.1e-18 94.7 104 45.2
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 6.1e-18 94.7 73 67.1
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.8e-17 93.2 84 58.3
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 2.6e-16 89.4 65 67.7
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 3.7e-15 85.5 173 40.5
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 1.3e-12 77.0 98 43.9
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.7e-10 69.3 108 36.1


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