Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 2.1e-70 268.9 132 100.0
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 1.8e-29 132.9 132 58.3
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 5.9e-20 101.3 135 49.6
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 4.7e-17 91.7 111 54.1
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 4.7e-17 91.7 102 53.9
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 1.4e-16 90.1 102 52.9
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.1e-15 87.0 141 45.4
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 7.4e-15 84.3 126 46.0
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 9.7e-15 84.0 95 49.5
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 2.2e-14 82.8 78 56.4
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 3.7e-14 82.0 101 49.5
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 4.8e-14 81.6 111 47.7
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 5.3e-13 78.2 111 47.7
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 1.2e-12 77.0 101 47.5
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.6e-12 76.6 128 41.4
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 1.6e-12 76.6 105 47.6
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 2.0e-12 76.3 132 43.2
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 3.5e-12 75.5 111 43.2
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 4.5e-12 75.1 138 41.3
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.0e-11 73.9 111 43.2
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 1.0e-11 73.9 111 43.2
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 3.8e-11 72.0 113 43.4
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 5.0e-11 71.6 68 57.4
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 8.5e-11 70.9 95 46.3
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 1.5e-10 70.1 138 40.6
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.9e-10 69.7 129 43.4
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 2.5e-10 69.3 94 47.9
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.2e-10 68.9 104 44.2
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 3.2e-10 68.9 93 47.3
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 4.2e-10 68.6 95 42.1
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 4.2e-10 68.6 134 41.8
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 4.2e-10 68.6 132 40.2
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 5.5e-10 68.2 112 41.1
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 7.2e-10 67.8 80 48.8
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 1.6e-09 66.6 77 51.9
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 1.6e-09 66.6 106 42.5
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 2.1e-09 66.2 52 61.5
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 3.6e-09 65.5 127 40.9
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 6.1e-09 64.7 107 43.0
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 8.0e-09 64.3 48 64.6
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.0e-08 63.9 141 41.1
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 1.0e-08 63.9 51 60.8
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 1.4e-08 63.5 141 41.1
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 1.8e-08 63.2 96 44.8
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 2.3e-08 62.8 102 45.1
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.3e-08 62.8 99 43.4
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 2.3e-08 62.8 102 45.1
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 2.3e-08 62.8 133 42.1
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 3.0e-08 62.4 82 50.0
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 3.0e-08 62.4 64 48.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 4.0e-08 62.0 132 35.6
Sabra01G0149600 Salix brachista HOM05D007722 ORTHO05D009730 4.0e-08 62.0 46 58.7
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 5.2e-08 61.6 128 38.3
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 8.8e-08 60.8 96 41.7
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 1.2e-07 60.5 134 37.3
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 1.2e-07 60.5 84 41.7
Carub.0001s4151 Capsella rubella HOM05D007722 ORTHO05D009730 1.5e-07 60.1 83 38.6
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 2.0e-07 59.7 128 41.4
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 2.0e-07 59.7 95 45.3
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 3.3e-07 58.9 136 35.3
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 3.3e-07 58.9 136 35.3
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 5.7e-07 58.2 103 39.8
CDE07G1717 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 9.7e-07 57.4 93 45.2
Sp3g14100 Schrenkiella parvula HOM05D007722 ORTHO05D009730 1.3e-06 57.0 50 52.0
AL1G60800 Arabidopsis lyrata HOM05D007722 ORTHO05D009730 1.7e-06 56.6 132 34.1
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 1.7e-06 56.6 50 52.0
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 2.2e-06 56.2 50 52.0
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 2.2e-06 56.2 93 39.8
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 3.7e-06 55.5 86 39.5
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 3.7e-06 55.5 63 46.0
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 4.8e-06 55.1 123 39.8
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 6.3e-06 54.7 119 36.1
BcaC05g28932 Brassica carinata HOM05D000020 ORTHO05D000543 8.2e-06 54.3 50 48.0
C05p50590 Brassica napus HOM05D000020 ORTHO05D000543 8.2e-06 54.3 50 48.0


User provided reference genes

Program Settings