Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 1.1e-48 196.4 111 100.0
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 1.2e-13 80.1 94 56.4
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 8.5e-12 73.9 58 67.2
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 4.2e-11 71.6 95 48.4
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 5.5e-11 71.2 60 68.3
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 5.5e-11 71.2 60 68.3
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 5.5e-11 71.2 60 68.3
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 7.2e-11 70.9 92 55.4
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 1.2e-10 70.1 72 58.3
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 4.6e-10 68.2 77 57.1
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 1.0e-09 67.0 79 55.7
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 1.8e-09 66.2 58 63.8
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 2.3e-09 65.9 61 59.0
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 5.1e-09 64.7 70 55.7
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 5.1e-09 64.7 51 66.7
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 6.7e-09 64.3 71 53.5
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 8.8e-09 63.9 44 72.7
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 8.8e-09 63.9 95 45.3
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 1.1e-08 63.5 67 55.2
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 1.5e-08 63.2 68 51.5
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 1.9e-08 62.8 44 72.7
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 1.9e-08 62.8 42 76.2
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 1.9e-08 62.8 61 60.7
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 1.9e-08 62.8 74 55.4
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 1.9e-08 62.8 44 72.7
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 2.5e-08 62.4 88 50.0
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 2.5e-08 62.4 69 53.6
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 3.3e-08 62.0 44 72.7
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 3.3e-08 62.0 49 69.4
BcaC07g41504 Brassica carinata HOM05D010306 ORTHO05D009265 4.3e-08 61.6 53 62.3
A09p61440 Brassica napus HOM05D010306 ORTHO05D009265 4.3e-08 61.6 53 62.3
C08p45000 Brassica napus HOM05D010306 ORTHO05D009265 4.3e-08 61.6 53 62.3
BolC8t52046H Brassica oleracea HOM05D010306 ORTHO05D009265 4.3e-08 61.6 53 62.3
BraA09t41515Z Brassica rapa HOM05D010306 ORTHO05D009265 4.3e-08 61.6 53 62.3
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 4.3e-08 61.6 69 53.6
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 4.3e-08 61.6 64 56.2
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 7.4e-08 60.8 73 53.4
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 7.4e-08 60.8 57 59.6
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 9.7e-08 60.5 91 50.5
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 1.7e-07 59.7 72 52.8
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 1.7e-07 59.7 78 53.8
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.2e-07 59.3 92 47.8
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 2.8e-07 58.9 90 48.9
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 2.8e-07 58.9 71 52.1
A08p31600 Brassica napus HOM05D010306 ORTHO05D009265 3.7e-07 58.5 64 56.2
BraA06t24319Z Brassica rapa HOM05D010306 ORTHO05D009265 3.7e-07 58.5 53 64.2
BraA08t35082Z Brassica rapa HOM05D010306 ORTHO05D009265 3.7e-07 58.5 64 56.2
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 3.7e-07 58.5 93 45.2
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 3.7e-07 58.5 45 62.2
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 3.7e-07 58.5 109 39.4
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 4.8e-07 58.2 45 64.4
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 4.8e-07 58.2 102 44.1
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 6.3e-07 57.8 74 52.7
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 6.3e-07 57.8 91 47.3
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 8.2e-07 57.4 35 82.9
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 8.2e-07 57.4 80 46.2
BcaB03g14543 Brassica carinata HOM05D010306 ORTHO05D009265 1.1e-06 57.0 73 47.9
BcaC05g25488 Brassica carinata HOM05D010306 ORTHO05D009265 1.1e-06 57.0 53 60.4
C05p13530 Brassica napus HOM05D010306 ORTHO05D009265 1.1e-06 57.0 53 60.4
BolC5t30090H Brassica oleracea HOM05D010306 ORTHO05D009265 1.1e-06 57.0 53 60.4
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.1e-06 57.0 104 42.3
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 1.1e-06 57.0 68 48.5
Phvul.005G176000 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 1.1e-06 57.0 67 55.2
Sp1g13730 Schrenkiella parvula HOM05D010306 ORTHO05D009265 1.1e-06 57.0 73 50.7
Thhalv10009244m.g Eutrema salsugineum HOM05D010306 ORTHO05D009265 1.8e-06 56.2 53 58.5
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 2.4e-06 55.8 44 70.5
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 2.4e-06 55.8 104 44.2
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.4e-06 55.8 104 43.3
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.4e-06 55.8 104 44.2
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 2.4e-06 55.8 59 57.6
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 3.1e-06 55.5 101 42.6
CsaV3_7G032550 Cucumis sativus L. HOM05D007863 ORTHO05D009265 3.1e-06 55.5 42 71.4
Sed0015441 Sechium edule HOM05D007863 ORTHO05D009265 5.3e-06 54.7 46 67.4
CARHR015920 Cardamine hirsuta HOM05D010306 ORTHO05D009265 6.9e-06 54.3 52 57.7
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 6.9e-06 54.3 52 57.7
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 6.9e-06 54.3 69 50.7
Sed0016812 Sechium edule HOM05D007863 ORTHO05D009265 9.1e-06 53.9 32 81.2


User provided reference genes

Program Settings