Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G041133 Manihot esculenta HOM05D000085 ORTHO05D250125 2.5e-36 154.8 73 100.0
Manes.11G042332 Manihot esculenta HOM05D000085 ORTHO05D249911 9.1e-31 136.3 70 92.9
Manes.11G040632 Manihot esculenta HOM05D000085 ORTHO05D251071 4.5e-30 134.0 70 91.4
Manes.11G041900 Manihot esculenta HOM05D000085 ORTHO05D010570 2.2e-29 131.7 70 88.6
Manes.11G042166 Manihot esculenta HOM05D000085 ORTHO05D010570 1.8e-15 85.5 64 60.9
Manes.07G065855 Manihot esculenta HOM05D000085 ORTHO05D010570 2.3e-13 78.6 66 57.6
Manes.11G042900 Manihot esculenta HOM05D000085 ORTHO05D010570 3.1e-10 68.2 68 48.5
Manes.07G052900 Manihot esculenta HOM05D000085 ORTHO05D010570 1.7e-08 62.4 54 57.4
Gohir.A02G121000 Gossypium hirsutum HOM05D000085 ORTHO05D000274 2.9e-08 61.6 68 44.1
Gohir.D03G060800 Gossypium hirsutum HOM05D000085 ORTHO05D000274 2.9e-08 61.6 68 44.1
Gorai.003G065300 Gossypium raimondii HOM05D000085 ORTHO05D000274 2.9e-08 61.6 68 44.1
Manes.04G127100 Manihot esculenta HOM05D000085 ORTHO05D010570 1.4e-07 59.3 51 49.0
Manes.04G127400 Manihot esculenta HOM05D000085 ORTHO05D010570 1.4e-07 59.3 51 45.1
Manes.04G127533 Manihot esculenta HOM05D000085 ORTHO05D010570 1.4e-07 59.3 51 45.1
Manes.11G043701 Manihot esculenta HOM05D000085 ORTHO05D010570 1.4e-07 59.3 50 56.0
Manes.04G127950 Manihot esculenta HOM05D000085 ORTHO05D010570 1.9e-07 58.9 58 51.7
Manes.11G043250 Manihot esculenta HOM05D000085 ORTHO05D010570 2.4e-07 58.5 55 52.7
Manes.07G086200 Manihot esculenta HOM05D000139 ORTHO05D000103 3.2e-07 58.2 53 50.9
HanXRQChr13g0410261 Helianthus annuus HOM05D000085 ORTHO05D000274 9.2e-07 56.6 68 39.7
CsaV3_2G014640 Cucumis sativus L. HOM05D000085 ORTHO05D000274 1.2e-06 56.2 60 40.0
Manes.07G053432 Manihot esculenta HOM05D000085 ORTHO05D010570 2.0e-06 55.5 42 61.9
COL.COLO4_30403 Corchorus olitorius HOM05D000085 ORTHO05D000274 2.7e-06 55.1 64 40.6
CSS0014010 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D000274 3.5e-06 54.7 63 39.7
Duzib160G0352 Durio zibethinus HOM05D000085 ORTHO05D000274 4.6e-06 54.3 63 41.3
Duzib235G1180 Durio zibethinus HOM05D000085 ORTHO05D000274 4.6e-06 54.3 47 48.9
RcHm_v2.0_Chr2g0138601 Rosa chinensis HOM05D000085 ORTHO05D000274 4.6e-06 54.3 63 44.4
MELO3C020981.2 Cucumis melo HOM05D000085 ORTHO05D000274 6.0e-06 53.9 57 40.4
Phvul.010G149300 Phaseolus vulgaris HOM05D000085 ORTHO05D000274 6.0e-06 53.9 68 41.2
Eucgr.J02967 Eucalyptus grandis HOM05D000085 ORTHO05D000274 7.8e-06 53.5 52 46.2
Sed0020830 Sechium edule HOM05D000085 ORTHO05D000274 7.8e-06 53.5 68 39.7


User provided reference genes

Program Settings