Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G030700 Manihot esculenta HOM05D008383 ORTHO05D010186 2.2e-27 125.2 76 100.0
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 4.3e-15 84.3 77 62.3
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 9.5e-15 83.2 78 61.5
Sabra01G0138800 Salix brachista HOM05D008383 ORTHO05D010186 1.2e-14 82.8 77 70.1
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 2.2e-11 72.0 68 60.3
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 4.9e-11 70.9 76 52.6
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.9e-10 68.9 76 63.2
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.9e-10 68.9 76 63.2
Sabra02G0114800 Salix brachista HOM05D008383 ORTHO05D010186 1.9e-10 68.9 78 69.2
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 1.9e-10 68.9 78 56.4
Sabra03G0035500 Salix brachista HOM05D008383 ORTHO05D010186 3.2e-10 68.2 78 62.8
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 4.1e-10 67.8 76 61.8
Sabra02G0116400 Salix brachista HOM05D008383 ORTHO05D010186 1.6e-09 65.9 76 68.4
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 6.0e-09 63.9 76 48.7
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.0e-08 63.2 77 44.2
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.0e-08 63.2 76 48.7
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 3.0e-08 61.6 78 51.3
Nn8g38998 Nelumbo nucifera HOM05D008383 ORTHO05D010186 6.6e-08 60.5 74 44.6
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.1e-07 59.7 76 43.4
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.5e-07 59.3 68 50.0
Rhsim12G0203900 Rhododendron simsii HOM05D008383 ORTHO05D010186 1.5e-07 59.3 79 55.7
CsaV3_7G035160 Cucumis sativus L. HOM05D008383 ORTHO05D010186 1.9e-07 58.9 73 54.8
Sed0020534 Sechium edule HOM05D008383 ORTHO05D010186 1.9e-07 58.9 74 51.4
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 3.3e-07 58.2 76 47.4
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 3.3e-07 58.2 74 48.6
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 3.3e-07 58.2 79 53.2
Aqoxy7G03951 Aquilegia oxysepala HOM05D009023 ORTHO05D011144 4.3e-07 57.8 44 59.1
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 4.3e-07 57.8 66 43.9
Eucgr.F03091 Eucalyptus grandis HOM05D008383 ORTHO05D010186 5.6e-07 57.4 66 60.6
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 9.6e-07 56.6 74 45.9
COL.COLO4_30544 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.2e-06 56.2 72 55.6
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 1.2e-06 56.2 76 46.1
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 1.6e-06 55.8 74 48.6
Sed0013242 Sechium edule HOM05D008383 ORTHO05D010186 3.6e-06 54.7 76 42.1
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 4.7e-06 54.3 71 40.8
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 8.1e-06 53.5 79 44.3


User provided reference genes

Program Settings