Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G006500 Manihot esculenta HOM05D002385 ORTHO05D002245 2.9e-42 174.9 93 100.0
Dinv05962 Davidia involucrata HOM05D014462 ORTHO05D018947 2.8e-16 88.6 103 58.3
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 1.7e-13 79.3 96 45.8
CiPaw.09G078200 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.1e-12 76.6 58 63.8
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 1.9e-12 75.9 94 46.8
GSVIVG01015779001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.9e-12 75.9 91 47.3
Actinidia11006 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.9e-10 68.2 94 43.6
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 6.6e-10 67.4 93 43.0
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 1.1e-09 66.6 95 41.1
Duzib235G0963 Durio zibethinus HOM05D014462 ORTHO05D002245 1.5e-09 66.2 106 41.5
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 1.9e-09 65.9 94 43.6
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 1.9e-09 65.9 94 43.6
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 2.5e-09 65.5 94 43.6
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 2.5e-09 65.5 94 43.6
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 2.5e-09 65.5 94 43.6
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.5e-09 65.5 94 43.6
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 2.5e-09 65.5 94 43.6
Thecc.07G152000 Theobroma cacao HOM05D021429 ORTHO05D022417 2.5e-09 65.5 93 41.9
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 4.3e-09 64.7 94 42.6
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 5.6e-09 64.3 90 42.2
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 7.3e-09 63.9 94 42.6
Dinv18438 Davidia involucrata HOM05D002385 ORTHO05D002245 7.3e-09 63.9 96 43.8
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 7.3e-09 63.9 91 41.8
Sed0023256 Sechium edule HOM05D002385 ORTHO05D002245 7.3e-09 63.9 65 56.9
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 9.6e-09 63.5 89 42.7
AL4G27550 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 9.6e-09 63.5 94 42.6
CiPaw.11G059900 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.3e-08 63.2 96 38.5
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 1.6e-08 62.8 94 40.4
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.6e-08 62.8 55 56.4
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 2.1e-08 62.4 55 60.0
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 2.1e-08 62.4 94 42.6
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 2.8e-08 62.0 94 42.6
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 2.8e-08 62.0 96 43.8
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 2.8e-08 62.0 94 38.3
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.6e-08 61.6 94 40.4
AL4G27570 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 3.6e-08 61.6 97 42.3
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 4.8e-08 61.2 55 58.2
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 4.8e-08 61.2 59 52.5
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 4.8e-08 61.2 90 41.1
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 4.8e-08 61.2 90 41.1
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 6.2e-08 60.8 55 58.2
FAN16G2212 Fragaria x ananassa HOM05D014462 ORTHO05D018947 8.1e-08 60.5 98 48.0
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 8.1e-08 60.5 97 44.3
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 8.1e-08 60.5 96 44.8
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 1.1e-07 60.1 95 43.2
Rhsim06G0138200 Rhododendron simsii HOM05D002385 ORTHO05D002245 1.1e-07 60.1 95 38.9
Sabra15G0137200 Salix brachista HOM05D012689 ORTHO05D002245 1.1e-07 60.1 103 45.6
Sed0017850 Sechium edule HOM05D002385 ORTHO05D002245 1.1e-07 60.1 95 38.9
GSVIVG01015780001 Vitis vinifera HOM05D002385 ORTHO05D002245 1.1e-07 60.1 91 42.9
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 1.4e-07 59.7 58 50.0
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 1.4e-07 59.7 58 50.0
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 2.4e-07 58.9 93 41.9
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 3.1e-07 58.5 90 42.2
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 3.1e-07 58.5 97 39.2
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 3.1e-07 58.5 94 41.5
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 3.1e-07 58.5 94 39.4
FAN21G2635 Fragaria x ananassa HOM05D014462 ORTHO05D018947 4.0e-07 58.2 98 46.9
Carub.0004s1351 Capsella rubella HOM05D002385 ORTHO05D002245 9.0e-07 57.0 95 40.0
Migut.M00099 Erythranthe guttata HOM05D002385 ORTHO05D002245 9.0e-07 57.0 82 45.1
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 9.0e-07 57.0 58 51.7
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 9.0e-07 57.0 93 38.7
GSVIVG01015788001 Vitis vinifera HOM05D002385 ORTHO05D002245 9.0e-07 57.0 56 57.1
Actinidia11100 Actinidia chinensis HOM05D003155 ORTHO05D002245 1.2e-06 56.6 57 52.6
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 1.2e-06 56.6 89 52.8
vmacro09249 Vaccinium macrocarpon HOM05D002385 ORTHO05D002245 1.2e-06 56.6 94 41.5
Thhalv10011923m.g Eutrema salsugineum HOM05D014824 ORTHO05D002245 1.5e-06 56.2 61 47.5
Manes.05G115500 Manihot esculenta HOM05D002385 ORTHO05D002245 2.0e-06 55.8 58 55.2
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 2.0e-06 55.8 94 37.2
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 4.4e-06 54.7 83 38.6
Lsat_1_v5_gn_1_82281 Lactuca sativa HOM05D019240 ORTHO05D002245 5.8e-06 54.3 55 56.4
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 5.8e-06 54.3 94 38.3
QL11p017947 Quercus lobata HOM05D002385 ORTHO05D002245 5.8e-06 54.3 110 36.4
AT2G32200 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 7.6e-06 53.9 95 36.8
CiPaw.15G117700 Carya illinoinensis HOM05D019240 ORTHO05D002245 7.6e-06 53.9 56 50.0
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 7.6e-06 53.9 91 37.4
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 9.9e-06 53.5 96 39.6
FvH4_1g21001 Fragaria vesca HOM05D002385 ORTHO05D002245 9.9e-06 53.5 64 45.3
HanXRQChr01g0017681 Helianthus annuus HOM05D002385 ORTHO05D002245 9.9e-06 53.5 56 57.1
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 9.9e-06 53.5 82 39.0


User provided reference genes

Program Settings