Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G003500 Manihot esculenta HOM05D008152 ORTHO05D010231 3.4e-32 141.0 67 100.0
Sed0008507 Sechium edule HOM05D008152 ORTHO05D010231 1.9e-11 72.0 38 71.1
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 1.6e-10 68.9 56 53.6
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 3.7e-10 67.8 57 56.1
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 6.2e-10 67.0 60 51.7
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 6.2e-10 67.0 55 56.4
Ciclev10033235m.g Citrus clementina HOM05D008152 ORTHO05D010231 8.2e-10 66.6 50 66.0
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 1.1e-09 66.2 55 56.4
ClCG05G020750 Citrullus lanatus HOM05D008152 ORTHO05D010231 1.4e-09 65.9 44 61.4
CAN.G1237.35 Capsicum annuum HOM05D008152 ORTHO05D010231 1.8e-09 65.5 63 49.2
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 2.4e-09 65.1 47 61.7
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 3.1e-09 64.7 54 51.9
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 5.3e-09 63.9 30 83.3
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 6.9e-09 63.5 33 69.7
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 2.0e-08 62.0 57 49.1
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 2.0e-08 62.0 55 54.5
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 2.6e-08 61.6 37 64.9
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 2.6e-08 61.6 50 52.0
Aa31LG1G21240 Aethionema arabicum HOM05D008152 ORTHO05D010231 3.4e-08 61.2 27 81.5
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 7.6e-08 60.1 55 50.9
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 7.6e-08 60.1 55 50.9
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 2.2e-07 58.5 60 46.7
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 2.9e-07 58.2 27 77.8
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 2.9e-07 58.2 27 77.8
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 2.9e-07 58.2 55 50.9
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 2.9e-07 58.2 57 54.4
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 3.8e-07 57.8 56 50.0
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 3.8e-07 57.8 27 74.1
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 4.9e-07 57.4 46 56.5
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 4.9e-07 57.4 46 56.5
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 4.9e-07 57.4 46 56.5
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 4.9e-07 57.4 46 56.5
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 1.1e-06 56.2 55 49.1
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 1.1e-06 56.2 55 49.1
Thecc.10G170800 Theobroma cacao HOM05D018277 ORTHO05D020787 1.1e-06 56.2 63 49.2
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 1.4e-06 55.8 27 70.4
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 1.4e-06 55.8 27 70.4
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 1.4e-06 55.8 27 70.4
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 1.9e-06 55.5 27 74.1
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 2.5e-06 55.1 27 74.1
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 2.5e-06 55.1 27 74.1
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 2.5e-06 55.1 51 51.0
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 4.2e-06 54.3 60 43.3
Gohir.A10G182400 Gossypium hirsutum HOM05D018277 ORTHO05D020787 4.2e-06 54.3 35 65.7
Gohir.D10G189100 Gossypium hirsutum HOM05D018277 ORTHO05D020787 4.2e-06 54.3 35 65.7
Gorai.011G212400 Gossypium raimondii HOM05D018277 ORTHO05D020787 4.2e-06 54.3 35 65.7
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 5.5e-06 53.9 36 58.3
Phvul.001G124150 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 5.5e-06 53.9 47 53.2
Phvul.001G124600 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 5.5e-06 53.9 47 53.2
THA.LOC104816407 Tarenaya hassleriana HOM05D008152 ORTHO05D010231 5.5e-06 53.9 51 51.0
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 7.1e-06 53.5 54 46.3
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 9.3e-06 53.1 33 63.6
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 9.3e-06 53.1 32 65.6


User provided reference genes

Program Settings