Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 6.1e-68 260.8 139 100.0
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 9.5e-29 130.6 140 60.0
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 1.8e-27 126.3 139 59.0
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 3.1e-27 125.6 139 59.7
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 4.0e-27 125.2 140 57.1
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.2e-26 123.6 130 58.5
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 1.2e-26 123.6 139 55.4
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 7.6e-26 120.9 141 55.3
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 3.7e-25 118.6 155 54.8
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 4.9e-25 118.2 149 53.0
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 2.4e-24 115.9 141 56.7
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 2.4e-24 115.9 129 57.4
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 3.2e-24 115.5 141 55.3
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 5.4e-24 114.8 143 52.4
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 7.1e-24 114.4 141 55.3
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 7.1e-24 114.4 143 54.5
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 1.6e-23 113.2 142 52.8
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 3.5e-23 112.1 149 51.7
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 4.6e-23 111.7 122 58.2
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 6.0e-23 111.3 138 57.2
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 7.8e-23 110.9 97 64.9
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 7.8e-23 110.9 131 57.3
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 6.6e-22 107.8 142 54.9
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 6.6e-22 107.8 134 54.5
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 8.6e-22 107.5 135 53.3
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 1.1e-21 107.1 104 58.7
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.9e-21 106.3 134 52.2
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.2e-20 103.6 165 47.9
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 1.6e-20 103.2 106 59.4
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 2.1e-20 102.8 165 47.9
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 4.7e-20 101.7 135 48.9
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 8.1e-20 100.9 127 51.2
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 1.4e-19 100.1 96 61.5
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 1.4e-19 100.1 96 61.5
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 1.4e-19 100.1 93 60.2
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 1.8e-19 99.8 124 53.2
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 2.4e-19 99.4 91 72.5
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 3.1e-19 99.0 137 47.4
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 3.1e-19 99.0 97 55.7
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 4.0e-19 98.6 97 56.7
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 4.0e-19 98.6 128 50.0
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 1.2e-18 97.1 82 65.9
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.5e-18 96.7 96 57.3
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.6e-18 95.9 143 47.6
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 2.6e-18 95.9 141 47.5
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 5.8e-18 94.7 94 60.6
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 9.9e-18 94.0 95 54.7
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.9e-18 94.0 93 61.3
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 2.9e-17 92.4 131 51.1
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 2.9e-17 92.4 94 60.6
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 2.9e-17 92.4 94 60.6
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 3.8e-17 92.0 96 57.3
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 4.9e-17 91.7 140 44.3
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 6.4e-17 91.3 109 52.3
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 8.4e-17 90.9 136 50.0
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.4e-16 90.1 97 53.6
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.4e-16 90.1 97 53.6
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 3.2e-16 89.0 135 46.7
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 4.2e-16 88.6 100 60.0
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 5.4e-16 88.2 97 51.5
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 5.4e-16 88.2 142 44.4
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 7.1e-16 87.8 99 61.6
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 9.3e-16 87.4 97 50.5
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.6e-15 86.7 95 57.9
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 1.6e-15 86.7 97 57.7
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.6e-15 86.7 97 57.7
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 2.1e-15 86.3 97 49.5
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 2.1e-15 86.3 149 47.0
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 2.7e-15 85.9 97 51.5
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 2.7e-15 85.9 97 56.7
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 3.5e-15 85.5 98 57.1
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 4.6e-15 85.1 136 43.4
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 4.6e-15 85.1 97 49.5
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 4.6e-15 85.1 97 49.5
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 4.6e-15 85.1 136 43.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 4.6e-15 85.1 143 44.8
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 4.6e-15 85.1 111 50.5
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 1.7e-14 83.2 125 44.8
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 2.3e-14 82.8 94 48.9
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 2.3e-14 82.8 134 40.3
CDE06G1029 Ceratophyllum demersum HOM05D007435 ORTHO05D009338 2.3e-14 82.8 125 48.0
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 6.6e-14 81.3 133 39.8
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.1e-13 80.5 136 44.1
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.1e-13 80.5 96 50.0
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 1.5e-13 80.1 135 43.0
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 1.9e-13 79.7 111 48.6
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 2.5e-13 79.3 129 44.2
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 2.5e-13 79.3 137 42.3
Zm00001eb363190 Zea mays HOM05D007435 ORTHO05D009338 9.6e-13 77.4 110 45.5
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 1.6e-12 76.6 121 46.3
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 1.1e-11 73.9 89 51.7
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 2.4e-11 72.8 89 51.7
HPP92_025000 Vanilla planifolia HOM05D007435 ORTHO05D009338 2.4e-11 72.8 107 43.9
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 1.2e-10 70.5 137 38.0
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 1.5e-10 70.1 114 44.7
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 1.5e-10 70.1 173 35.3
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.0e-10 69.7 89 48.3
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 5.8e-10 68.2 91 46.2
Zm00001eb141550 Zea mays HOM05D007435 ORTHO05D009338 1.7e-09 66.6 120 40.8
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 4.9e-09 65.1 132 36.4
Os01g0940600 Oryza sativa ssp. japonica HOM05D007435 ORTHO05D009338 6.4e-09 64.7 91 42.9
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 3.2e-08 62.4 114 42.1
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 1.3e-06 57.0 76 47.4
Potri.003G203300 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.7e-06 56.6 92 47.8


User provided reference genes

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