Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G153100 Manihot esculenta HOM05D011216 ORTHO05D009894 3.6e-72 275.0 160 100.0
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 4.3e-17 92.0 165 43.6
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 7.4e-17 91.3 190 41.6
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 2.1e-16 89.7 176 43.2
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 2.4e-15 86.3 173 39.3
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 1.2e-14 84.0 161 42.2
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 4.5e-14 82.0 195 36.4
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 1.7e-13 80.1 179 40.8
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 6.5e-13 78.2 193 37.3
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 3.2e-12 75.9 172 37.2
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 3.5e-11 72.4 187 34.8
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 4.6e-11 72.0 165 34.5
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 6.1e-11 71.6 162 35.8
Thhalv10017383m.g Eutrema salsugineum HOM05D011216 ORTHO05D009894 6.1e-11 71.6 155 36.1
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 7.9e-11 71.2 178 36.5
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 1.0e-10 70.9 155 37.4
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 1.8e-10 70.1 178 36.5
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 3.0e-10 69.3 152 36.8
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 5.1e-10 68.6 197 33.5
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 5.1e-10 68.6 178 36.0
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 6.7e-10 68.2 179 34.1
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 8.7e-10 67.8 168 36.3
A05p13660 Brassica napus HOM05D011216 ORTHO05D009894 1.1e-09 67.4 151 33.8
BraA05t20304Z Brassica rapa HOM05D011216 ORTHO05D009894 1.1e-09 67.4 151 33.8
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 1.1e-09 67.4 167 35.3
Aqoxy1G00435 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 1.5e-09 67.0 180 33.3
C04p17830 Brassica napus HOM05D011216 ORTHO05D009894 1.5e-09 67.0 147 36.7
BolC4t23331H Brassica oleracea HOM05D011216 ORTHO05D009894 1.5e-09 67.0 147 36.7
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 1.5e-09 67.0 156 37.2
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 4.3e-09 65.5 171 38.0
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 7.4e-09 64.7 161 36.0
MBI01_g20511_MAGBIO Magnolia biondii HOM05D011216 ORTHO05D009894 7.4e-09 64.7 165 35.2
Carub.0004s1323 Capsella rubella HOM05D011216 ORTHO05D009894 9.7e-09 64.3 167 35.3
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 9.7e-09 64.3 201 34.8
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 1.3e-08 63.9 160 36.2
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 1.3e-08 63.9 123 39.8
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.3e-08 63.9 171 36.8
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 2.2e-08 63.2 160 37.5
CsaV3_7G031540 Cucumis sativus L. HOM05D008109 ORTHO05D009894 4.8e-08 62.0 138 40.6
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 4.8e-08 62.0 171 35.7
AL4G27230 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 6.3e-08 61.6 161 32.9
AL80U10010 Arabidopsis lyrata HOM05D011216 ORTHO05D009894 6.3e-08 61.6 161 32.9
MELO3C023500.2 Cucumis melo HOM05D008109 ORTHO05D009894 8.2e-08 61.2 160 38.1
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 2.4e-07 59.7 175 33.1
AT2G31930 Arabidopsis thaliana HOM05D011216 ORTHO05D009894 3.1e-07 59.3 152 33.6
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 4.1e-07 58.9 139 33.1
ClCG09G003640 Citrullus lanatus HOM05D008109 ORTHO05D009894 6.9e-07 58.2 146 39.0
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 1.2e-06 57.4 171 35.1
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 2.0e-06 56.6 256 29.3
BcaC02g11299 Brassica carinata HOM05D011216 ORTHO05D009894 7.7e-06 54.7 131 35.9


User provided reference genes

Program Settings