Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 2.7e-62 241.9 126 100.0
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 3.6e-19 98.6 132 48.5
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 4.8e-19 98.2 130 50.8
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 6.2e-19 97.8 127 40.9
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 8.1e-19 97.4 126 52.4
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.2e-17 93.6 105 53.3
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.5e-17 93.2 105 53.3
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 3.4e-17 92.0 105 52.4
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 3.4e-17 92.0 105 52.4
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 1.7e-16 89.7 103 46.6
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 1.7e-16 89.7 93 58.1
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 4.9e-16 88.2 93 57.0
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 1.1e-15 87.0 120 42.5
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 1.9e-15 86.3 85 52.9
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 9.3e-15 84.0 108 48.1
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 9.3e-15 84.0 100 50.0
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 4.6e-14 81.6 129 40.3
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 2.3e-13 79.3 93 53.8
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 2.3e-13 79.3 130 42.3
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 6.6e-13 77.8 125 41.6
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 8.7e-13 77.4 129 41.1
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 2.5e-12 75.9 95 49.5
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 5.6e-12 74.7 88 46.6
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 1.3e-11 73.6 100 46.0
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 1.6e-11 73.2 120 40.0
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 1.6e-11 73.2 106 44.3
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 2.8e-11 72.4 81 50.6
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 3.6e-11 72.0 95 47.4
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 4.8e-11 71.6 128 39.1
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 4.8e-11 71.6 103 47.6
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 6.2e-11 71.2 118 42.4
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 1.4e-10 70.1 94 45.7
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 1.4e-10 70.1 80 53.8
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 1.4e-10 70.1 120 41.7
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 4.0e-10 68.6 91 48.4
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 6.9e-10 67.8 121 43.0
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 6.9e-10 67.8 121 43.0
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 3.4e-09 65.5 114 37.7
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 9.9e-09 63.9 131 37.4
CsaV3_7G031470 Cucumis sativus L. HOM05D008423 ORTHO05D010599 2.2e-08 62.8 125 39.2
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 2.9e-08 62.4 106 38.7
FAN01G2867 Fragaria x ananassa HOM05D008423 ORTHO05D010599 3.8e-08 62.0 82 51.2
FAN10G1262 Fragaria x ananassa HOM05D008423 ORTHO05D010599 6.4e-08 61.2 93 46.2
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 1.9e-07 59.7 106 37.7
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 2.4e-07 59.3 82 42.7
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 4.2e-07 58.5 80 45.0
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 2.1e-06 56.2 74 40.5
Sed0026701 Sechium edule HOM05D008423 ORTHO05D010599 2.1e-06 56.2 124 34.7
HanXRQChr15g0480651 Helianthus annuus HOM05D008423 ORTHO05D010599 2.7e-06 55.8 116 39.7


User provided reference genes

Program Settings