Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 1.1e-61 240.0 132 100.0
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.3e-51 206.5 126 90.5
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 4.2e-50 201.4 132 84.1
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.2e-49 199.9 132 84.1
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 4.6e-49 198.0 126 86.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 7.9e-49 197.2 132 83.3
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 7.9e-49 197.2 132 84.8
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.0e-48 196.8 132 84.8
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 1.0e-48 196.8 132 82.6
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.9e-48 194.9 127 84.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-47 193.4 131 83.2
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.5e-47 193.0 132 82.6
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.9e-47 192.6 133 83.5
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.3e-47 191.8 132 81.8
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 5.6e-47 191.0 132 81.1
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 7.4e-47 190.7 132 83.3
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 7.4e-47 190.7 131 81.7
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.6e-46 189.5 126 83.3
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.6e-46 189.5 132 78.8
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.1e-46 189.1 120 86.7
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 2.1e-46 189.1 120 86.7
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 2.1e-46 189.1 132 78.8
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 2.1e-46 189.1 138 78.3
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 3.7e-46 188.3 132 79.5
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.8e-46 188.0 131 79.4
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.4e-45 186.4 132 78.0
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.8e-45 186.0 121 85.1
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 2.4e-45 185.7 132 78.8
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 4.0e-45 184.9 125 81.6
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 4.0e-45 184.9 132 78.8
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 4.0e-45 184.9 117 88.0
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 5.3e-45 184.5 118 83.1
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 6.9e-45 184.1 132 78.0
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 9.0e-45 183.7 120 84.2
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 9.0e-45 183.7 121 84.3
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.2e-44 183.3 123 80.5
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 1.2e-44 183.3 125 80.8
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.2e-44 183.3 127 80.3
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 2.6e-44 182.2 123 82.9
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 4.5e-44 181.4 122 80.3
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 4.5e-44 181.4 124 82.3
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 5.8e-44 181.0 137 75.2
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 1.0e-43 180.3 124 79.0
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-43 179.9 155 70.3
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 1.7e-43 179.5 130 78.5
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 3.8e-43 178.3 130 77.7
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 6.5e-43 177.6 120 81.7
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 1.1e-42 176.8 110 90.0
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.1e-42 176.8 123 78.9
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 1.1e-42 176.8 124 79.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.4e-42 176.4 121 81.0
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 1.4e-42 176.4 121 77.7
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.4e-42 176.4 112 84.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 2.5e-42 175.6 128 77.3
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.5e-42 175.6 128 76.6
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 4.2e-42 174.9 131 78.6
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 7.1e-42 174.1 125 77.6
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 7.1e-42 174.1 127 77.2
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 7.1e-42 174.1 127 77.2
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 7.1e-42 174.1 112 83.9
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 1.2e-41 173.3 114 82.5
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 1.2e-41 173.3 114 82.5
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 1.2e-41 173.3 114 82.5
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 1.3e-40 169.9 119 75.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 1.3e-40 169.9 132 72.0
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 1.8e-40 169.5 121 76.0
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.8e-40 169.5 132 71.2
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 1.8e-40 169.5 114 79.8
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.9e-40 168.3 115 74.8
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.9e-40 168.3 115 74.8
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.9e-40 168.3 136 69.9
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.9e-40 168.3 136 69.9
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.1e-40 167.9 112 83.0
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 5.1e-40 167.9 114 78.9
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 6.7e-40 167.5 127 76.4
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 1.1e-39 166.8 152 65.8
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 1.1e-39 166.8 114 78.9
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 3.3e-39 165.2 111 78.4
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 4.3e-39 164.9 168 61.3
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 5.7e-39 164.5 112 82.1
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 7.4e-39 164.1 126 73.0
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 1.3e-38 163.3 114 78.1
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.6e-38 162.9 125 73.6
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 8.2e-38 160.6 120 72.5
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 1.5e-36 156.4 126 68.3
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.0e-35 153.7 115 73.9
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.4e-34 149.8 120 68.3
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.2e-33 146.7 134 67.2
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 2.7e-33 145.6 126 65.1
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.0e-32 143.7 122 62.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 8.7e-32 140.6 114 70.2
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 1.5e-31 139.8 132 62.9
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.5e-31 139.0 104 72.1
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 5.7e-31 137.9 126 62.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 9.7e-31 137.1 128 67.2
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 2.4e-29 132.5 130 60.8
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.0e-27 124.8 89 78.7
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.9e-26 122.9 111 64.0
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.2e-25 120.2 109 63.3
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 3.6e-25 118.6 116 61.2
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 1.8e-21 106.3 74 75.7
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 2.2e-19 99.4 118 49.2
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 5.0e-19 98.2 95 63.2
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.6e-17 93.2 68 69.1
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 3.3e-15 85.5 125 40.0
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 7.4e-15 84.3 103 47.6
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.4e-13 80.1 51 84.3
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 6.5e-11 71.2 55 65.5
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 4.2e-10 68.6 52 71.2


User provided reference genes

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