Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 4.5e-211 737.6 364 100.0
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 9.2e-148 527.3 364 69.8
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.9e-145 519.6 361 68.7
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.3e-135 486.1 344 67.7
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 6.8e-135 484.6 343 66.2
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 3.4e-134 482.3 355 65.6
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 9.8e-134 480.7 344 66.9
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.1e-132 477.2 359 64.1
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 1.4e-132 476.9 343 66.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 5.4e-132 474.9 345 67.0
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 7.0e-132 474.6 350 65.1
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 7.0e-132 474.6 353 65.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-131 473.8 343 65.0
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.0e-130 470.7 345 64.6
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 3.0e-130 469.2 345 66.7
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 3.9e-130 468.8 350 66.3
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.3e-129 465.3 342 66.7
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-128 463.8 346 64.2
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.6e-128 463.4 362 63.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.1e-128 463.0 357 63.6
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.8e-128 462.6 350 65.7
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.7e-128 461.8 362 63.3
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 4.7e-128 461.8 355 63.7
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 4.7e-128 461.8 350 65.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 6.2e-128 461.5 327 67.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 6.2e-128 461.5 327 67.0
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 6.2e-128 461.5 350 63.7
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 8.1e-128 461.1 333 66.7
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 3.1e-127 459.1 351 62.1
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 6.8e-127 458.0 345 64.3
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.5e-126 456.8 345 64.3
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.3e-125 453.8 364 61.0
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 1.3e-125 453.8 350 63.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 1.7e-125 453.4 346 65.6
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.2e-125 453.0 347 64.0
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.2e-125 453.0 348 63.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 8.3e-125 451.1 347 63.4
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 8.3e-125 451.1 356 60.7
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.1e-124 450.7 340 62.9
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.4e-124 450.3 349 62.8
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 3.2e-124 449.1 347 64.6
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 4.1e-124 448.7 345 63.5
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 5.4e-124 448.4 345 64.6
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.7e-123 446.0 355 60.8
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 3.5e-123 445.7 355 61.4
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 4.6e-123 445.3 340 62.4
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 6.0e-123 444.9 345 60.3
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 7.8e-123 444.5 346 63.9
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.0e-122 444.1 328 64.9
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 6.6e-122 441.4 352 59.7
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 8.6e-122 441.0 346 61.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.5e-121 439.5 326 65.0
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 4.3e-121 438.7 348 60.9
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 9.5e-121 437.6 328 63.4
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.6e-120 436.8 351 59.8
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 4.7e-120 435.3 353 58.4
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 2.0e-118 429.9 341 60.7
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.4e-118 429.1 351 57.5
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.7e-117 426.8 348 58.6
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.7e-117 426.8 348 58.6
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.2e-117 426.4 351 58.1
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.9e-117 426.0 364 59.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.4e-116 422.9 350 58.3
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.4e-116 422.9 311 68.2
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 5.4e-116 421.8 368 54.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 5.4e-116 421.8 350 58.6
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 9.2e-116 421.0 351 57.5
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.1e-115 419.9 341 61.0
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.7e-115 419.5 347 60.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 4.6e-115 418.7 346 58.4
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.3e-114 417.2 347 59.7
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 3.0e-114 416.0 328 61.6
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 5.1e-114 415.2 345 57.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 1.1e-113 414.1 372 55.1
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.8e-112 409.5 275 68.7
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 6.2e-112 408.3 344 58.7
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 2.4e-111 406.4 382 53.9
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 6.9e-111 404.8 322 60.6
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.9e-110 401.0 336 58.3
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.8e-109 399.1 341 58.9
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 3.8e-109 399.1 342 59.4
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.2e-108 395.6 336 59.5
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.3e-106 389.8 320 60.9
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.3e-104 384.0 272 71.3
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.2e-101 373.2 342 57.0
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.4e-100 369.8 252 70.6
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.4e-100 369.8 252 70.6
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.0e-98 364.4 328 54.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 4.8e-96 355.5 333 53.2
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.9e-93 346.3 343 51.9
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-91 340.9 268 63.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.0e-90 337.8 310 58.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.0e-90 337.8 341 51.3
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.5e-89 334.0 347 52.2
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.1e-87 327.8 341 53.1
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.6e-86 323.2 352 49.4
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.3e-85 320.9 246 63.8
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.6e-83 313.9 266 61.3
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 3.5e-83 312.8 304 56.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 1.1e-76 291.2 239 57.7
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.5e-76 290.0 263 52.9
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.8e-72 276.6 208 64.4
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.7e-69 267.3 188 60.6
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.9e-69 266.5 215 63.7
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 2.2e-64 250.4 310 46.5
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.4e-63 246.9 243 55.1
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.0e-61 241.5 350 38.0
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 4.8e-48 196.1 131 62.6
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 2.3e-42 177.2 144 58.3
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 1.9e-36 157.5 311 37.6
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 6.3e-32 142.5 100 66.0
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 9.5e-28 128.6 146 46.6
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 2.3e-26 124.0 206 37.4
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 4.3e-20 103.2 67 65.7
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.9e-15 87.8 69 62.3
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 9.9e-09 65.5 83 50.6


User provided reference genes

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