Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.3e-205 719.5 382 100.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 7.8e-166 587.4 386 79.3
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 1.5e-164 583.2 386 79.3
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.1e-156 557.0 351 80.1
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.9e-156 556.2 383 76.2
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 3.3e-156 555.4 391 76.7
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 3.3e-156 555.4 375 77.9
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 7.3e-156 554.3 381 76.9
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.6e-155 553.1 383 76.0
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 2.1e-155 552.7 388 75.5
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.1e-155 552.7 387 78.0
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 6.9e-154 547.7 332 86.4
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.2e-153 547.0 382 77.0
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 4.5e-153 545.0 381 75.6
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.7e-152 543.1 388 74.0
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 2.9e-152 542.3 384 74.7
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 2.9e-152 542.3 362 77.9
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 4.9e-152 541.6 347 79.5
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 6.4e-152 541.2 385 74.0
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 8.4e-152 540.8 397 73.8
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-151 540.4 391 74.9
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 1.4e-151 540.0 388 73.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 4.2e-151 538.5 381 74.3
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.1e-150 536.2 395 73.9
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.1e-150 536.2 388 73.7
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.1e-150 536.2 393 73.0
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 3.5e-150 535.4 348 78.7
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.6e-150 535.0 379 73.6
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 7.9e-150 534.3 391 73.9
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 7.9e-150 534.3 350 78.9
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.0e-149 533.9 382 75.1
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.0e-149 533.9 384 73.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.3e-149 533.5 379 74.7
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.3e-149 533.5 384 73.7
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.3e-149 533.5 384 73.7
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 2.3e-149 532.7 379 73.6
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 3.9e-149 531.9 384 73.4
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 6.7e-149 531.2 389 72.8
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.1e-148 530.4 385 73.0
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.1e-148 530.4 392 72.4
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.1e-148 530.4 392 72.4
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 2.5e-148 529.3 391 72.4
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 2.5e-148 529.3 385 73.5
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.5e-148 529.3 391 72.6
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 3.3e-148 528.9 386 73.1
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 3.3e-148 528.9 386 73.1
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 5.6e-148 528.1 383 73.4
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 9.6e-148 527.3 386 75.6
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 9.6e-148 527.3 366 76.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.3e-147 526.9 386 73.6
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 4.8e-147 525.0 379 73.4
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 8.1e-147 524.2 387 73.1
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.4e-146 523.5 373 75.3
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.4e-146 523.5 374 74.1
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 3.1e-146 522.3 394 71.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 3.1e-146 522.3 383 72.1
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 4.0e-146 521.9 349 77.9
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 1.2e-145 520.4 359 75.5
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.2e-145 520.4 381 73.0
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.5e-145 520.0 390 70.8
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 2.0e-145 519.6 387 73.6
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 5.8e-145 518.1 390 72.8
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 7.6e-145 517.7 391 72.9
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.3e-144 516.9 392 71.2
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.7e-144 516.5 387 71.3
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 2.9e-144 515.8 342 78.4
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.5e-144 514.6 377 73.2
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 6.5e-144 514.6 380 72.6
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 9.3e-143 510.8 349 76.5
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.1e-142 509.6 381 71.7
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.7e-142 509.2 405 69.6
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 7.9e-142 507.7 347 75.8
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.9e-142 507.7 336 78.9
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.3e-141 506.9 394 71.1
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 3.0e-141 505.8 380 70.0
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.9e-141 505.4 336 78.6
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 1.9e-140 503.1 380 70.8
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.3e-140 502.3 381 71.4
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 2.8e-139 499.2 416 65.9
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.4e-138 496.9 380 69.5
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.4e-138 496.1 391 69.8
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 8.4e-136 487.6 276 89.5
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 3.2e-135 485.7 382 68.8
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.1e-134 483.0 391 68.0
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 2.7e-134 482.6 345 72.5
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.0e-133 480.7 331 75.8
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.0e-133 479.2 389 68.1
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 1.5e-132 476.9 390 67.9
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.9e-132 476.5 338 76.0
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 2.5e-132 476.1 384 68.0
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.3e-132 475.3 389 66.1
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.7e-132 474.9 367 70.3
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 5.7e-132 474.9 331 74.6
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 6.9e-130 468.0 341 73.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.5e-129 466.8 346 74.0
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 3.4e-129 465.7 341 71.6
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.3e-128 463.8 346 73.7
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.7e-128 463.4 296 80.4
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 7.9e-126 454.5 346 70.8
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 2.4e-122 443.0 298 78.9
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.7e-120 436.8 390 63.8
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 7.2e-119 431.4 352 68.2
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.3e-115 420.6 290 74.5
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 7.0e-114 414.8 276 75.7
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 5.9e-113 411.8 290 71.0
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.4e-109 400.6 288 70.8
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.5e-108 397.1 233 86.3
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.0e-105 386.7 287 67.9
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.0e-96 357.8 348 56.9
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 2.1e-94 350.1 284 66.9
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.8e-93 347.1 200 86.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 6.8e-85 318.5 282 59.6
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 3.4e-84 316.2 277 62.1
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 3.7e-83 312.8 240 63.3
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.3e-83 311.6 229 73.4
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 5.0e-80 302.4 222 71.2
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.9e-79 300.4 254 59.1
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 3.3e-71 273.1 183 73.8
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 7.5e-68 261.9 220 65.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-63 247.3 160 81.2
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 1.4e-53 214.5 203 58.6
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 2.4e-53 213.8 198 60.6
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 1.4e-50 204.5 126 81.7
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.2e-49 201.4 109 91.7
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 1.3e-48 198.0 202 62.4
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-47 194.9 137 76.6
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 1.5e-47 194.5 152 67.1
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 1.9e-47 194.1 195 57.4
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.6e-39 166.0 114 71.9
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 1.3e-32 144.8 256 35.9
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.3e-31 139.8 237 37.6
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.4e-26 124.8 187 47.1
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.3e-24 118.2 157 45.9
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 1.9e-23 114.4 167 40.7
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 5.7e-23 112.8 241 32.0
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 3.1e-21 107.1 76 72.4
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.1e-21 106.7 65 80.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 8.4e-19 99.0 50 96.0
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.6e-14 84.7 123 48.8
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-13 81.6 96 49.0


User provided reference genes

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