Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G148400 Manihot esculenta HOM05D011480 ORTHO05D011200 2.6e-27 124.8 69 100.0
Manes.10G148500 Manihot esculenta HOM05D011480 ORTHO05D011200 1.0e-23 112.8 69 88.4
Manes.10G148600 Manihot esculenta HOM05D011480 ORTHO05D011200 9.6e-22 106.3 69 87.0
Potri.001G226754 Populus trichocarpa HOM05D011480 ORTHO05D011200 7.1e-09 63.5 64 62.5
Potri.001G226500 Populus trichocarpa HOM05D011480 ORTHO05D011200 1.2e-08 62.8 64 62.5
Glyma.08G151100 Glycine max HOM05D012142 ORTHO05D011200 2.7e-08 61.6 66 59.1
FAN23G0079 Fragaria x ananassa HOM05D009914 ORTHO05D012375 6.0e-08 60.5 66 54.5
Potri.001G226400 Populus trichocarpa HOM05D011480 ORTHO05D011200 7.9e-08 60.1 64 59.4
Potri.001G226700 Populus trichocarpa HOM05D011480 ORTHO05D011200 7.9e-08 60.1 64 59.4
Lalb_Chr25g0283311 Lupinus albus HOM05D012142 ORTHO05D011200 1.8e-07 58.9 66 59.1
Potri.009G022366 Populus trichocarpa HOM05D011480 ORTHO05D011200 3.0e-07 58.2 60 61.7
RcHm_v2.0_Chr2g0123881 Rosa chinensis HOM05D009914 ORTHO05D012375 1.5e-06 55.8 67 55.2
RcHm_v2.0_Chr2g0123801 Rosa chinensis HOM05D009914 ORTHO05D012375 2.5e-06 55.1 67 55.2
Potri.001G226650 Populus trichocarpa HOM05D011480 ORTHO05D011200 3.3e-06 54.7 64 60.9
Potri.001G226750 Populus trichocarpa HOM05D011480 ORTHO05D011200 3.3e-06 54.7 64 60.9
Phvul.005G038500 Phaseolus vulgaris HOM05D012142 ORTHO05D011200 4.3e-06 54.3 64 56.2
Prupe.2G006300 Prunus persica HOM05D009914 ORTHO05D011200 4.3e-06 54.3 64 59.4
RcHm_v2.0_Chr2g0123781 Rosa chinensis HOM05D009914 ORTHO05D012375 4.3e-06 54.3 65 56.9
Prupe.2G006700 Prunus persica HOM05D009914 ORTHO05D011200 5.6e-06 53.9 64 59.4
RcHm_v2.0_Chr1g0314271 Rosa chinensis HOM05D009914 ORTHO05D012375 9.6e-06 53.1 69 53.6
RcHm_v2.0_Chr2g0123821 Rosa chinensis HOM05D009914 ORTHO05D012375 9.6e-06 53.1 64 53.1


User provided reference genes

Program Settings