Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G145300 Manihot esculenta HOM05D005524 ORTHO05D005392 1.1e-16 89.4 65 100.0
Potri.001G268800 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.7e-10 68.2 65 67.7
Potri.009G063600 Populus trichocarpa HOM05D005524 ORTHO05D005392 3.5e-10 67.8 65 66.2
Sabra16G0164700 Salix brachista HOM05D005524 ORTHO05D005392 3.0e-09 64.7 65 64.6
CiPaw.13G003600 Carya illinoinensis HOM05D005524 ORTHO05D005392 6.7e-09 63.5 65 66.2
Manes.07G004601 Manihot esculenta HOM05D005524 ORTHO05D005392 4.3e-08 60.8 65 58.5
A09p50540 Brassica napus HOM05D005524 ORTHO05D005392 1.6e-07 58.9 65 56.9
BcaC07g40352 Brassica carinata HOM05D005524 ORTHO05D005392 2.2e-07 58.5 65 56.9
C08p33270 Brassica napus HOM05D005524 ORTHO05D005392 2.2e-07 58.5 65 56.9
BolC8t50929H Brassica oleracea HOM05D005524 ORTHO05D005392 2.2e-07 58.5 65 56.9
Sp5g04940 Schrenkiella parvula HOM05D005524 ORTHO05D005392 2.8e-07 58.2 65 55.4
TWI73G1008 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 2.8e-07 58.2 65 53.8
TWI09G0988 Tripterygium wilfordii HOM05D005524 ORTHO05D005392 3.7e-07 57.8 65 53.8
AT3G57690 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 4.8e-07 57.4 65 55.4
BraA09t40508Z Brassica rapa HOM05D005524 ORTHO05D005392 4.8e-07 57.4 65 55.4
CARHR167870 Cardamine hirsuta HOM05D005524 ORTHO05D005392 4.8e-07 57.4 65 55.4
BcaC08g44863 Brassica carinata HOM05D005524 ORTHO05D005392 6.3e-07 57.0 65 53.8
A07p23640 Brassica napus HOM05D005524 ORTHO05D005392 6.3e-07 57.0 65 53.8
BolC6t37629H Brassica oleracea HOM05D005524 ORTHO05D005392 6.3e-07 57.0 65 53.8
BraA07t30018Z Brassica rapa HOM05D005524 ORTHO05D005392 6.3e-07 57.0 65 53.8
Thecc.01G412500 Theobroma cacao HOM05D005524 ORTHO05D005392 6.3e-07 57.0 66 56.1
Dinv18091 Davidia involucrata HOM05D005524 ORTHO05D005392 8.2e-07 56.6 65 55.4
AT2G41905 Arabidopsis thaliana HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 53.8
BcaC02g09954 Brassica carinata HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 52.3
A04p02980 Brassica napus HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 52.3
C04p34740 Brassica napus HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 52.3
BolC4t25028H Brassica oleracea HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 52.3
BraA04t16021Z Brassica rapa HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 52.3
CSS0022867 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 1.1e-06 56.2 65 56.9
BcaB02g07583 Brassica carinata HOM05D005524 ORTHO05D005392 1.4e-06 55.8 65 53.8
Haze_03228 Corylus avellana HOM05D000430 ORTHO05D000305 1.4e-06 55.8 67 53.7
C06p24770 Brassica napus HOM05D005524 ORTHO05D005392 1.8e-06 55.5 65 52.3
CARHR137000 Cardamine hirsuta HOM05D005524 ORTHO05D005392 1.8e-06 55.5 65 53.8
Duzib128G1940 Durio zibethinus HOM05D005524 ORTHO05D005392 1.8e-06 55.5 65 52.3
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla HOM05D005524 ORTHO05D005392 1.8e-06 55.5 65 53.8
BcaB02g08300 Brassica carinata HOM05D005524 ORTHO05D005392 2.4e-06 55.1 65 52.3
BcaB02g08302 Brassica carinata HOM05D005524 ORTHO05D005392 2.4e-06 55.1 65 52.3
CSS0036301 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 2.4e-06 55.1 65 55.4
Duzib093G2098 Durio zibethinus HOM05D005524 ORTHO05D005392 2.4e-06 55.1 66 56.1
Duzib106G1083 Durio zibethinus HOM05D005524 ORTHO05D005392 2.4e-06 55.1 66 56.1
Potri.006G056200 Populus trichocarpa HOM05D005524 ORTHO05D005392 2.4e-06 55.1 65 53.8
Sp4g24180 Schrenkiella parvula HOM05D005524 ORTHO05D005392 2.4e-06 55.1 65 53.8
AL4G40250 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 3.1e-06 54.7 65 52.3
AL5G39310 Arabidopsis lyrata HOM05D005524 ORTHO05D005392 3.1e-06 54.7 65 52.3
BcaC07g40149 Brassica carinata HOM05D005524 ORTHO05D005392 3.1e-06 54.7 65 55.4
Cfa010746 Carpinus fangiana HOM05D005524 ORTHO05D005392 3.1e-06 54.7 70 64.3
BcaC02g07275 Brassica carinata HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
A03p23470 Brassica napus HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
A04p31910 Brassica napus HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
C04p69380 Brassica napus HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
BolC4t28440H Brassica oleracea HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
BraA03t11563Z Brassica rapa HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
BraA04t18649Z Brassica rapa HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 52.3
Carub.0004s2422 Capsella rubella HOM05D005524 ORTHO05D005392 4.1e-06 54.3 65 50.8
Eucgr.H02490 Eucalyptus grandis HOM05D005524 ORTHO05D005392 5.3e-06 53.9 65 56.9
CSS0011241 Camellia sinensis var. sinensis HOM05D005524 ORTHO05D005392 6.9e-06 53.5 65 55.4
ClCG10G012450 Citrullus lanatus HOM05D005524 ORTHO05D005392 6.9e-06 53.5 65 52.3
BcaB01g03426 Brassica carinata HOM05D005524 ORTHO05D005392 9.0e-06 53.1 65 52.3


User provided reference genes

Program Settings