Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G144900 Manihot esculenta HOM05D012217 ORTHO05D009412 4.8e-26 120.6 67 100.0
Manes.07G004800 Manihot esculenta HOM05D012217 ORTHO05D013836 5.1e-12 73.9 70 70.0
Potri.009G062700 Populus trichocarpa HOM05D012217 ORTHO05D009412 9.6e-11 69.7 70 64.3
Potri.001G268400 Populus trichocarpa HOM05D012217 ORTHO05D009412 1.8e-09 65.5 69 58.0
Thecc.01G412200 Theobroma cacao HOM05D012217 ORTHO05D009412 1.8e-09 65.5 66 60.6
Manes.07G004700 Manihot esculenta HOM05D012217 ORTHO05D009412 3.1e-09 64.7 64 59.4
QL04p005539 Quercus lobata HOM05D012480 ORTHO05D013836 9.0e-09 63.2 68 57.4
QL04p005532 Quercus lobata HOM05D012480 ORTHO05D013836 2.0e-08 62.0 68 55.9
Sabra16G0164400 Salix brachista HOM05D012217 ORTHO05D009412 2.0e-08 62.0 67 55.2
TWI09G0015 Tripterygium wilfordii HOM05D012217 ORTHO05D013836 2.0e-08 62.0 68 55.9
Manes.07G005200 Manihot esculenta HOM05D012217 ORTHO05D009412 3.4e-08 61.2 67 58.2
QL04p005558 Quercus lobata HOM05D012480 ORTHO05D013836 7.6e-08 60.1 70 54.3
QL04p005573 Quercus lobata HOM05D012480 ORTHO05D013836 7.6e-08 60.1 68 54.4
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.0e-07 59.7 71 56.3
Potri.009G063200 Populus trichocarpa HOM05D012217 ORTHO05D009412 4.9e-07 57.4 67 49.3
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.4e-06 55.8 69 55.1
Cpa.g.sc85.131 Carica papaya HOM05D008319 ORTHO05D009412 1.9e-06 55.5 65 49.2
CiPaw.13G003700 Carya illinoinensis HOM05D012480 ORTHO05D013836 5.5e-06 53.9 72 54.2
Sabra06G0013900 Salix brachista HOM05D012217 ORTHO05D009412 5.5e-06 53.9 62 54.8


User provided reference genes

Program Settings