Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.2e-101 373.2 201 100.0
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 9.4e-86 320.5 201 84.6
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 4.7e-85 318.2 201 83.1
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 5.7e-75 284.6 201 76.1
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 1.7e-74 283.1 209 74.2
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 2.2e-71 272.7 203 72.4
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 5.0e-71 271.6 200 74.5
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 8.5e-71 270.8 207 71.0
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.5e-70 269.2 206 74.8
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 3.2e-70 268.9 200 73.0
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 4.2e-70 268.5 165 84.2
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 7.2e-70 267.7 207 71.0
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 1.2e-69 266.9 205 71.7
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.1e-69 266.2 207 70.0
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.6e-69 265.4 200 76.0
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 6.1e-69 264.6 170 80.0
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 3.0e-68 262.3 201 71.6
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 3.0e-68 262.3 210 68.1
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 4.0e-68 261.9 201 71.6
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 2.0e-67 259.6 213 70.9
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 2.6e-67 259.2 202 70.8
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 3.4e-67 258.8 196 74.0
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.4e-67 258.8 170 79.4
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 9.8e-67 257.3 207 68.6
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 2.8e-66 255.8 162 79.0
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 3.7e-66 255.4 207 69.6
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 6.3e-66 254.6 161 78.3
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 6.3e-66 254.6 213 67.1
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 8.3e-66 254.2 206 66.5
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 8.3e-66 254.2 201 70.1
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 1.8e-65 253.1 176 74.4
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 3.1e-65 252.3 208 65.4
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 3.1e-65 252.3 200 71.5
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 5.4e-65 251.5 207 67.6
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 5.4e-65 251.5 208 67.8
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 7.0e-65 251.1 207 72.0
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 9.1e-65 250.8 169 77.5
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.2e-64 250.4 207 67.1
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.2e-64 250.4 207 67.1
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.2e-64 250.4 174 76.4
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.2e-64 250.4 162 79.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 2.7e-64 249.2 161 77.0
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 2.7e-64 249.2 208 66.8
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.7e-64 249.2 200 67.5
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.5e-64 248.8 206 67.0
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 4.5e-64 248.4 155 79.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.0e-63 247.3 202 71.8
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 1.0e-63 247.3 207 66.7
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 1.0e-63 247.3 207 66.7
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.7e-63 246.5 165 75.2
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 2.9e-63 245.7 204 65.7
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 3.8e-63 245.4 211 63.5
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 3.8e-63 245.4 213 65.7
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 6.6e-63 244.6 147 82.3
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 6.6e-63 244.6 205 66.8
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 8.6e-63 244.2 206 66.5
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.1e-62 243.8 207 65.7
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 1.5e-62 243.4 207 68.1
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 4.2e-62 241.9 173 72.3
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 5.5e-62 241.5 203 69.0
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 7.2e-62 241.1 208 65.4
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 9.5e-62 240.7 210 65.2
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.2e-61 240.4 162 76.5
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.2e-61 240.4 141 83.0
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.6e-61 240.0 141 83.0
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.7e-61 238.4 208 69.7
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 6.1e-61 238.0 134 86.6
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 8.0e-61 237.7 209 64.6
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 1.4e-60 236.9 196 68.4
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 5.2e-60 235.0 142 81.0
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 5.2e-60 235.0 151 76.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 6.8e-60 234.6 186 69.4
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.5e-59 233.4 148 76.4
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 4.4e-59 231.9 133 85.7
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 5.7e-59 231.5 206 63.1
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 2.2e-58 229.6 133 82.0
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 2.8e-58 229.2 158 74.7
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 4.9e-58 228.4 198 63.6
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 8.3e-58 227.6 208 66.8
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 1.1e-57 227.3 201 69.2
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 2.4e-57 226.1 158 74.1
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 8.6e-55 217.6 163 69.3
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.1e-54 217.2 209 63.2
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.9e-54 216.5 218 56.9
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.9e-54 216.5 218 56.9
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 5.6e-54 214.9 203 63.1
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 9.5e-54 214.2 163 69.3
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 9.5e-54 214.2 168 66.1
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 3.6e-53 212.2 213 60.1
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 8.0e-53 211.1 200 56.5
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 1.0e-52 210.7 201 61.2
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.4e-52 210.3 204 59.8
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.4e-52 210.3 204 59.8
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.2e-52 208.4 173 64.7
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 6.8e-52 208.0 219 57.1
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 2.2e-50 203.0 114 82.5
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 5.4e-49 198.4 161 60.9
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 5.4e-49 198.4 207 57.0
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 4.6e-48 195.3 142 69.7
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.5e-46 190.3 133 69.2
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.5e-46 190.3 133 69.2
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 2.1e-45 186.4 136 70.6
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 2.1e-45 186.4 161 59.6
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.2e-43 180.6 102 83.3
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 8.3e-42 174.5 139 59.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 8.3e-42 174.5 133 65.4
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 7.0e-41 171.4 165 55.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 8.1e-37 157.9 98 80.6
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 8.1e-37 157.9 98 80.6
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 8.3e-34 147.9 96 77.1
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 3.1e-28 129.4 88 75.0
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.5e-27 127.1 90 67.8
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.1e-25 118.2 102 62.7
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 8.1e-21 104.8 166 40.4
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.9e-14 83.6 161 34.2
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 6.2e-13 78.6 123 42.3
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 4.9e-10 68.9 50 60.0


User provided reference genes

Program Settings