Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G142700 Manihot esculenta HOM05D004723 ORTHO05D006176 0.0e+00 1285.8 747 100.0
Potri.005G108800 Populus trichocarpa HOM05D004723 ORTHO05D006176 4.4e-205 718.8 695 63.5
Atru.chr3.886 Acer truncatum HOM05D004723 ORTHO05D006176 1.1e-198 697.6 699 60.7
Atru.chr3.897 Acer truncatum HOM05D004723 ORTHO05D006176 1.1e-198 697.6 699 60.7
Sabra05G0089200 Salix brachista HOM05D004723 ORTHO05D006176 1.1e-198 697.6 693 62.3
Eucgr.I02314 Eucalyptus grandis HOM05D004723 ORTHO05D006176 3.2e-195 686.0 685 61.6
TWI09G0244 Tripterygium wilfordii HOM05D004723 ORTHO05D006176 4.6e-194 682.2 737 60.7
Gorai.012G044400 Gossypium raimondii HOM05D004723 ORTHO05D006176 2.1e-191 673.3 728 58.5
CiPaw.07G062200 Carya illinoinensis HOM05D004723 ORTHO05D006176 2.8e-191 672.9 722 58.3
Haze_03712 Corylus avellana HOM05D004723 ORTHO05D006176 1.7e-185 653.7 695 58.0
Thecc.08G139800 Theobroma cacao HOM05D004723 ORTHO05D006176 1.9e-184 650.2 715 58.0
Cpa.g.sc6.304 Carica papaya HOM05D004723 ORTHO05D006176 4.3e-184 649.0 742 59.7
GSVIVG01007226001 Vitis vinifera HOM05D004723 ORTHO05D006176 3.6e-183 646.0 671 56.0
Lj4A224T28 Lonicera japonica HOM05D004723 ORTHO05D006176 1.4e-182 644.0 744 56.7
Cfa007019 Carpinus fangiana HOM05D004723 ORTHO05D006176 2.4e-182 643.3 693 57.0
Gohir.A05G376600 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.4e-182 643.3 739 56.4
ClCG05G000690 Citrullus lanatus HOM05D004723 ORTHO05D006176 4.0e-182 642.5 719 55.2
MELO3C006009.2 Cucumis melo HOM05D004723 ORTHO05D006176 5.2e-182 642.1 727 56.4
Duzib147G1420 Durio zibethinus HOM05D004723 ORTHO05D006176 2.0e-181 640.2 714 55.7
Ciclev10025027m.g Citrus clementina HOM05D004723 ORTHO05D006176 4.4e-181 639.0 688 62.4
CSS0036730 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 2.9e-180 636.3 711 56.7
Sed0008382 Sechium edule HOM05D004723 ORTHO05D006176 1.7e-177 627.1 750 54.7
QL06p051414 Quercus lobata HOM05D004723 ORTHO05D006176 1.5e-176 624.0 735 57.4
Nn5g30820 Nelumbo nucifera HOM05D004723 ORTHO05D006176 9.6e-176 621.3 693 53.5
CSS0012813 Camellia sinensis var. sinensis HOM05D004723 ORTHO05D006176 3.6e-175 619.4 745 54.0
Nitab4.5_0006899g0060 Nicotiana tabacum HOM05D004723 ORTHO05D006176 1.1e-174 617.8 752 54.9
CsaV3_3G007910 Cucumis sativus L. HOM05D004723 ORTHO05D006176 9.9e-173 611.3 732 54.4
Sc07g0001170 Simmondsia chinensis HOM05D004723 ORTHO05D006176 1.7e-172 610.5 716 56.8
Cc07_g11220 Coffea canephora HOM05D004723 ORTHO05D006176 1.4e-171 607.4 730 53.4
Actinidia35669 Actinidia chinensis HOM05D004723 ORTHO05D006176 2.4e-171 606.7 715 56.4
Prupe.7G173800 Prunus persica HOM05D004723 ORTHO05D006176 9.3e-171 604.7 718 56.7
arahy.Tifrunner.gnm1.ann1.DG5MW5 Arachis hypogaea HOM05D004723 ORTHO05D006176 3.9e-169 599.4 728 54.8
Nitab4.5_0001789g0050 Nicotiana tabacum HOM05D004723 ORTHO05D006176 3.3e-168 596.3 750 54.9
Solyc02g083470.3 Solanum lycopersicum HOM05D004723 ORTHO05D006176 3.3e-168 596.3 748 54.5
ECA232G2222 Erigeron canadensis HOM05D004723 ORTHO05D006176 3.6e-167 592.8 693 54.5
HanXRQChr09g0257321 Helianthus annuus HOM05D004723 ORTHO05D006176 4.8e-167 592.4 751 53.4
PGSC0003DMG400003588 Solanum tuberosum HOM05D004723 ORTHO05D006176 6.9e-166 588.6 731 55.3
MSTRG.10980 Avicennia marina HOM05D004723 ORTHO05D006176 4.5e-165 585.9 712 52.1
Sopen02g028260 Solanum pennellii HOM05D004723 ORTHO05D006176 9.9e-165 584.7 745 54.6
VMungo0251G3240 Vigna mungo HOM05D004723 ORTHO05D006176 1.3e-164 584.3 735 52.5
arahy.Tifrunner.gnm1.ann1.7VD04T Arachis hypogaea HOM05D004723 ORTHO05D006176 1.1e-163 581.3 687 56.5
Peaxi162Scf00198g00136 Petunia axillaris HOM05D004723 ORTHO05D006176 5.1e-161 572.4 742 52.4
MD02G1124600 Malus domestica HOM05D004723 ORTHO05D006176 6.7e-161 572.0 649 59.9
Gohir.1Z049326 Gossypium hirsutum HOM05D004723 ORTHO05D006176 4.8e-159 565.8 711 53.4
PGR119G2074 Punica granatum HOM05D004723 ORTHO05D006176 1.8e-158 563.9 730 51.5
Lalb_Chr16g0391491 Lupinus albus HOM05D004723 ORTHO05D006176 4.0e-158 562.8 692 55.3
TAR628G1348 Trochodendron aralioides HOM05D004723 ORTHO05D006176 2.6e-157 560.1 715 52.7
DCAR_024713 Daucus carota HOM05D004723 ORTHO05D006176 5.8e-157 558.9 732 51.4
Phvul.003G266400 Phaseolus vulgaris HOM05D004723 ORTHO05D006176 7.6e-157 558.5 737 53.3
Hund14070 Selenicereus undatus HOM05D004723 ORTHO05D006176 2.7e-154 550.1 657 57.7
Glyma.16G122800 Glycine max HOM05D004723 ORTHO05D006176 3.5e-154 549.7 736 51.6
PSO675G8954 Papaver somniferum HOM05D004723 ORTHO05D006176 1.5e-152 544.3 752 46.7
Lj4g0028127 Lotus japonicus HOM05D004723 ORTHO05D006176 5.6e-152 542.3 687 53.1
CAN.G890.41 Capsicum annuum HOM05D004723 ORTHO05D006176 9.6e-152 541.6 705 49.4
FAN19G1371 Fragaria x ananassa HOM05D004723 ORTHO05D006176 9.6e-152 541.6 694 55.6
Glyma.02G045200 Glycine max HOM05D004723 ORTHO05D006176 4.8e-151 539.3 736 50.7
Psat7g090000 Pisum sativum HOM05D004723 ORTHO05D006176 2.4e-150 537.0 712 50.8
PSO541G1155 Papaver somniferum HOM05D004723 ORTHO05D006176 3.1e-150 536.6 733 48.0
EL10Ac6g15170 Beta vulgaris HOM05D004723 ORTHO05D006176 4.0e-150 536.2 741 52.4
FAN26G3228 Fragaria x ananassa HOM05D004723 ORTHO05D006176 9.0e-150 535.0 703 52.2
Rhsim08G0030800 Rhododendron simsii HOM05D004723 ORTHO05D006176 7.6e-149 531.9 724 50.3
FvH4_1g11200 Fragaria vesca HOM05D004723 ORTHO05D006176 2.9e-148 530.0 709 54.4
Lsat_1_v5_gn_4_144101 Lactuca sativa HOM05D004723 ORTHO05D006176 7.1e-147 525.4 762 47.1
Aqoxy6G02087 Aquilegia oxysepala HOM05D004723 ORTHO05D006176 1.6e-146 524.2 760 48.7
RcHm_v2.0_Chr2g0098611 Rosa chinensis HOM05D004723 ORTHO05D006176 2.1e-146 523.9 743 51.0
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 2.2e-143 513.8 709 51.6
CANSAT25G3056 Cannabis sativa HOM05D004723 ORTHO05D006176 3.7e-143 513.1 696 50.4
AT3G01160 Arabidopsis thaliana HOM05D004723 ORTHO05D006176 9.0e-142 508.4 719 52.2
Medtr4g096820 Medicago truncatula HOM05D004723 ORTHO05D006176 2.6e-141 506.9 749 48.3
Ca_18264_v3 Cicer arietinum L. HOM05D004723 ORTHO05D006176 4.2e-139 499.6 693 50.5
AL3G11100 Arabidopsis lyrata HOM05D004723 ORTHO05D006176 2.7e-138 496.9 657 52.7
Migut.F01827 Erythranthe guttata HOM05D004723 ORTHO05D006176 1.0e-137 495.0 541 54.9
vmacro18436 Vaccinium macrocarpon HOM05D004723 ORTHO05D006176 1.1e-136 491.5 734 45.5
SHI00027 Sapria himalayana HOM05D004723 ORTHO05D006176 5.7e-136 489.2 632 52.4
AUR62003701 Chenopodium quinoa HOM05D004723 ORTHO05D006176 6.3e-135 485.7 736 46.5
Oeu005338.2 Olea europaea HOM05D004723 ORTHO05D006176 3.4e-133 479.9 754 47.5
SGA_v2.0_scaffold111G31425 Striga asiatica HOM05D004723 ORTHO05D006176 7.9e-130 468.8 776 46.0
Sp3g00960 Schrenkiella parvula HOM05D004723 ORTHO05D006176 2.3e-129 467.2 721 49.1
FAN23G0842 Fragaria x ananassa HOM05D004723 ORTHO05D006176 3.8e-124 449.9 647 51.0
AUR62018009 Chenopodium quinoa HOM05D004723 ORTHO05D006176 1.9e-123 447.6 527 53.7
Aa31LG5G12460 Aethionema arabicum HOM05D004723 ORTHO05D006176 9.4e-123 445.3 709 49.2
Ah.01g003790 Amaranthus hybridus HOM05D004723 ORTHO05D006176 1.6e-122 444.5 695 46.3
Thhalv10020182m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 1.6e-122 444.5 699 49.1
TPR.G4863 Trifolium pratense HOM05D004723 ORTHO05D006176 5.7e-120 436.0 529 53.9
Gohir.1Z049627 Gossypium hirsutum HOM05D004723 ORTHO05D006176 2.2e-119 434.1 431 62.4
Carub.0003s0100 Capsella rubella HOM05D004723 ORTHO05D006176 3.7e-119 433.3 714 48.9
ATR0665G361 Amborella trichopoda HOM05D004723 ORTHO05D006176 1.8e-118 431.0 822 40.6
SEGI_08029 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 5.9e-117 426.0 530 51.1
Dinv40130 Davidia involucrata HOM05D004723 ORTHO05D006176 2.2e-116 424.1 300 71.3
BraA05t23177Z Brassica rapa HOM05D004723 ORTHO05D006176 3.2e-115 420.2 712 46.6
A05p44800 Brassica napus HOM05D004723 ORTHO05D006176 1.2e-114 418.3 712 46.8
Medtr4g073330 Medicago truncatula HOM05D004723 ORTHO05D006176 3.6e-114 416.8 696 45.5
CARHR075890 Cardamine hirsuta HOM05D004723 ORTHO05D006176 4.4e-112 409.8 709 46.7
AagrBONN_evm.TU.Sc2ySwM_117.2822 Anthoceros agrestis HOM05D004723 ORTHO05D006176 4.5e-109 399.8 730 40.5
BcaC05g30387 Brassica carinata HOM05D004723 ORTHO05D006176 4.5e-109 399.8 698 44.8
C09p75390 Brassica napus HOM05D004723 ORTHO05D006176 3.8e-108 396.7 696 44.1
BolC5t35121H Brassica oleracea HOM05D004723 ORTHO05D006176 3.6e-106 390.2 703 44.1
BcaC05g30489 Brassica carinata HOM05D004723 ORTHO05D006176 1.2e-104 385.2 704 45.6
Thecc.01G155000 Theobroma cacao HOM05D004723 ORTHO05D006176 3.1e-102 377.1 377 63.9
SMO232G0062 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 9.5e-99 365.5 624 43.8
CDE05G0976 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 9.8e-96 355.5 404 53.5
AagrBONN_evm.TU.Sc2ySwM_368.2747 Anthoceros agrestis HOM05D004723 ORTHO05D006176 1.4e-94 351.7 724 37.2
SMO239G0207 Selaginella moellendorffii HOM05D004723 ORTHO05D006176 1.4e-94 351.7 606 42.2
Zm00001eb323180 Zea mays HOM05D004723 ORTHO05D006176 1.7e-92 344.7 744 39.5
Os07g0531700 Oryza sativa ssp. japonica HOM05D004723 ORTHO05D006176 2.5e-91 340.9 688 42.3
BcaC01g04506 Brassica carinata HOM05D004723 ORTHO05D006176 6.8e-89 332.8 732 37.4
Pp3c17_7210 Physcomitrium patens HOM05D004723 ORTHO05D006176 1.6e-85 321.6 849 33.3
MD15G1238700 Malus domestica HOM05D004723 ORTHO05D006176 1.2e-80 305.4 328 57.0
Mapoly0061s0018 Marchantia polymorpha HOM05D004723 ORTHO05D006176 7.8e-77 292.7 861 31.9
Rhsim08G0030900 Rhododendron simsii HOM05D004723 ORTHO05D006176 4.7e-74 283.5 493 41.4
TAR628G1016 Trochodendron aralioides HOM05D004723 ORTHO05D005421 4.1e-70 270.4 210 65.7
Gohir.D04G039432 Gossypium hirsutum HOM05D004723 ORTHO05D006176 4.4e-64 250.4 297 53.9
HPP92_019125 Vanilla planifolia HOM05D004723 ORTHO05D006176 3.3e-59 234.2 200 55.5
COL.COLO4_34179 Corchorus olitorius HOM05D004723 ORTHO05D006176 9.0e-57 226.1 533 34.5
MD15G1238600 Malus domestica HOM05D004723 ORTHO05D006176 3.8e-55 220.7 271 56.8
C03p39900 Brassica napus HOM05D004723 ORTHO05D006176 4.9e-55 220.3 196 56.6
CBR_g41392 Chara braunii HOM05D004723 ORTHO05D006176 2.4e-54 218.0 696 29.5
COL.COLO4_33606 Corchorus olitorius HOM05D004723 ORTHO05D006176 1.5e-51 208.8 261 58.6
PRCOL_00004947 Prasinoderma coloniale HOM05D004723 ORTHO05D006176 8.1e-50 203.0 759 31.6
MCO13G085 Micromonas commoda HOM05D004723 ORTHO05D006176 2.0e-48 198.4 433 35.3
CDE05G0343 Ceratophyllum demersum HOM05D004723 ORTHO05D006176 2.0e-40 171.8 259 51.4
Cre10.g452500 Chlamydomonas reinhardtii HOM05D004723 ORTHO05D006176 3.8e-39 167.5 547 30.9
TPR.G3121 Trifolium pratense HOM05D004723 ORTHO05D006176 1.1e-38 166.0 248 41.1
HPP92_019124 Vanilla planifolia HOM05D004723 ORTHO05D006176 7.6e-32 143.3 255 40.0
TAR628G0893 Trochodendron aralioides HOM05D004723 ORTHO05D006176 1.9e-27 128.6 99 69.7
Dinv40131 Davidia involucrata HOM05D004723 ORTHO05D006176 3.3e-27 127.9 115 59.1
BolC3t16253H Brassica oleracea HOM05D004723 ORTHO05D006176 4.3e-27 127.5 111 53.2
Medtr3g107350 Medicago truncatula HOM05D004723 ORTHO05D006176 5.7e-27 127.1 290 44.8
GSVIVG01005594001 Vitis vinifera HOM05D004723 ORTHO05D006176 6.9e-25 120.2 187 43.9
Oeu046870.1 Olea europaea HOM05D004723 ORTHO05D006176 1.1e-22 112.8 141 50.4
Medtr3g107330 Medicago truncatula HOM05D004723 ORTHO05D006176 5.5e-22 110.5 99 50.5
GSVIVG01005388001 Vitis vinifera HOM05D004723 ORTHO05D006176 2.3e-20 105.1 73 71.2
TPR.G330 Trifolium pratense HOM05D004723 ORTHO05D006176 3.3e-19 101.3 107 50.5
THA.LOC104821168 Tarenaya hassleriana HOM05D004723 ORTHO05D006176 7.4e-19 100.1 128 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2819 Anthoceros agrestis HOM05D004723 ORTHO05D006176 2.2e-18 98.6 320 30.3
TPR.G36124 Trifolium pratense HOM05D004723 ORTHO05D006176 4.1e-17 94.4 89 51.7
Lsat_1_v5_gn_5_164041 Lactuca sativa HOM05D004723 ORTHO05D006176 5.9e-16 90.5 211 34.1
TPR.G29970 Trifolium pratense HOM05D004723 ORTHO05D006176 5.9e-16 90.5 100 52.0
Thecc.01G154900 Theobroma cacao HOM05D004723 ORTHO05D006176 7.7e-16 90.1 65 70.8
TPR.G21433 Trifolium pratense HOM05D004723 ORTHO05D006176 7.7e-16 90.1 187 36.4
Actinidia28727 Actinidia chinensis HOM05D004723 ORTHO05D006176 5.0e-15 87.4 68 72.1
COL.COLO4_33622 Corchorus olitorius HOM05D004723 ORTHO05D006176 3.6e-13 81.3 112 49.1
Thhalv10017085m.g Eutrema salsugineum HOM05D004723 ORTHO05D006176 1.4e-12 79.3 164 34.8
BolC3t16252H Brassica oleracea HOM05D004723 ORTHO05D006176 1.8e-12 79.0 60 66.7
SEGI_25425 Sequoiadendron giganteum HOM05D004723 ORTHO05D006176 4.1e-09 67.8 61 55.7
Nn1g05556 Nelumbo nucifera HOM05D004723 ORTHO05D006176 7.0e-09 67.0 48 58.3
FAN22G1655 Fragaria x ananassa HOM05D002244 ORTHO05D035452 7.7e-08 63.5 50 56.0
C03p39890 Brassica napus HOM05D004723 ORTHO05D019910 1.0e-07 63.2 72 51.4
BolC3t16251H Brassica oleracea HOM05D004723 ORTHO05D019910 1.7e-07 62.4 72 51.4
FAN03G2005 Fragaria x ananassa HOM05D004723 ORTHO05D002269 8.5e-07 60.1 50 52.0
FAN17G1680 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.9e-06 58.9 89 38.2
FAN24G3340 Fragaria x ananassa HOM05D032679 ORTHO05D022627 1.9e-06 58.9 89 38.2
FAN18G3965 Fragaria x ananassa HOM05D032679 ORTHO05D022627 4.2e-06 57.8 89 38.2


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