Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.1e-41 172.9 89 100.0
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 7.0e-33 143.7 89 80.9
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 7.0e-33 143.7 88 81.8
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.6e-32 142.5 89 79.8
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.5e-32 141.0 88 79.5
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 7.7e-32 140.2 87 79.3
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 7.7e-32 140.2 88 78.4
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 2.9e-31 138.3 86 80.2
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.9e-31 138.3 89 78.7
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.9e-31 138.3 89 78.7
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 2.9e-31 138.3 89 78.7
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 8.5e-31 136.7 87 79.3
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.5e-30 136.0 88 77.3
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 1.5e-30 136.0 89 75.3
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 4.2e-30 134.4 89 75.3
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 5.5e-30 134.0 89 76.4
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 7.2e-30 133.7 89 73.0
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 7.2e-30 133.7 89 76.4
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 7.2e-30 133.7 88 76.1
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 9.4e-30 133.3 89 77.5
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 9.4e-30 133.3 89 77.5
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 9.4e-30 133.3 89 76.4
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 9.4e-30 133.3 89 77.5
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 1.2e-29 132.9 89 73.0
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 1.2e-29 132.9 88 75.0
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.2e-29 132.9 88 77.3
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.2e-29 132.9 87 74.7
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 2.1e-29 132.1 89 76.4
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 73.0
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 73.0
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 2.7e-29 131.7 89 77.5
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 3.6e-29 131.3 89 76.4
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 3.6e-29 131.3 87 73.6
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 4.7e-29 131.0 87 75.9
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 4.7e-29 131.0 88 73.9
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 4.7e-29 131.0 86 73.3
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 8.0e-29 130.2 81 76.5
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 8.0e-29 130.2 81 76.5
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.0e-28 129.8 89 75.3
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 73.0
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 75.3
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 2.3e-28 128.6 89 75.3
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 2.3e-28 128.6 89 71.9
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 3.0e-28 128.3 87 72.4
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 3.0e-28 128.3 87 73.6
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 5.2e-28 127.5 84 78.6
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 5.2e-28 127.5 89 73.0
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 6.7e-28 127.1 89 76.4
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 8.8e-28 126.7 84 77.4
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.2e-27 126.3 89 71.9
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.2e-27 126.3 84 75.0
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 1.5e-27 125.9 89 73.0
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 2.0e-27 125.6 89 71.9
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.0e-27 125.6 89 74.2
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 2.6e-27 125.2 89 73.0
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 2.6e-27 125.2 89 74.2
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 3.3e-27 124.8 89 71.9
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 4.4e-27 124.4 102 64.7
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 7.5e-27 123.6 86 70.9
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 9.7e-27 123.2 84 75.0
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 9.7e-27 123.2 89 70.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 1.7e-26 122.5 88 70.5
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 69.3
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 8.3e-26 120.2 87 71.3
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.1e-25 119.8 89 70.8
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.1e-25 119.8 95 69.5
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.4e-25 119.4 81 75.3
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 1.8e-25 119.0 96 69.8
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 2.4e-25 118.6 91 70.3
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 2.4e-25 118.6 91 70.3
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 2.4e-25 118.6 91 70.3
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 2.4e-25 118.6 88 68.2
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 7.0e-25 117.1 91 71.4
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 7.0e-25 117.1 124 54.8
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 9.1e-25 116.7 91 69.2
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 9.1e-25 116.7 91 69.2
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 69.0
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 1.2e-24 116.3 87 70.1
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 2.0e-24 115.5 88 69.3
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 3.5e-24 114.8 87 67.8
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 7.7e-24 113.6 91 68.1
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 7.7e-24 113.6 91 68.1
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.0e-23 113.2 91 68.1
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.0e-23 113.2 82 69.5
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 2.2e-23 112.1 88 69.3
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 2.2e-23 112.1 87 67.8
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 3.8e-23 111.3 87 65.5
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 3.8e-23 111.3 115 57.4
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 8.5e-23 110.2 89 64.0
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.9e-22 109.0 87 64.4
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 3.2e-22 108.2 92 66.3
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 1.2e-21 106.3 124 49.2
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 8.0e-21 103.6 71 74.6
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.4e-20 102.8 83 68.7
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 4.4e-19 97.8 155 43.9
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 4.4e-19 97.8 155 43.9
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 2.0e-16 89.0 197 35.5
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 3.5e-16 88.2 59 71.2
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.7e-15 85.9 86 58.1
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 2.3e-15 85.5 60 75.0
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 2.9e-15 85.1 87 56.3
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 2.9e-15 85.1 79 58.2
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.9e-14 82.4 48 83.3
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 3.3e-14 81.6 48 81.2
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 9.5e-14 80.1 49 79.6
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 1.2e-13 79.7 66 59.1
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.6e-13 79.3 48 79.2
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 2.3e-12 75.5 48 77.1
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 2.6e-11 72.0 48 72.9
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 5.9e-08 60.8 42 73.8
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 7.8e-08 60.5 48 66.7


User provided reference genes

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