Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.3e-72 276.2 132 100.0
Manes.07G021500 Manihot esculenta HOM05D002599 ORTHO05D001895 7.6e-44 180.6 127 67.7
Manes.07G021600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.5e-36 156.4 125 60.8
Manes.07G021700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.4e-34 149.8 124 60.5
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-16 89.4 116 45.7
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-15 85.9 117 41.0
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.4e-15 85.1 117 41.0
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-14 83.2 113 43.4
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-14 82.4 115 42.6
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-13 80.1 115 42.6
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-12 77.0 118 38.1
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 4.5e-12 75.1 113 34.5
COL.COLO4_29532 Corchorus olitorius HOM05D002599 ORTHO05D025152 5.9e-12 74.7 111 36.0
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-11 73.9 113 36.3
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 1.0e-11 73.9 118 37.3
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-11 73.6 88 42.0
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-11 73.6 121 38.8
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.7e-11 73.2 116 37.1
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-11 73.2 119 38.7
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-11 72.8 118 37.3
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-11 72.8 118 37.3
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.2e-11 72.8 118 37.3
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 8.5e-11 70.9 119 37.8
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 8.5e-11 70.9 105 37.1
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.1e-10 70.5 117 33.3
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.5e-10 70.1 113 35.4
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-10 70.1 114 37.7
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.5e-10 70.1 116 37.9
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 69.7 102 42.2
Thecc.04G013500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.9e-10 69.7 98 40.8
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 2.5e-10 69.3 116 35.3
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.5e-10 69.3 118 36.4
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 2.5e-10 69.3 120 37.5
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-10 69.3 105 36.2
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 3.2e-10 68.9 109 35.8
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 3.2e-10 68.9 109 35.8
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.2e-10 68.9 116 37.1
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 4.2e-10 68.6 127 34.6
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 7.2e-10 67.8 114 36.0
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.2e-09 67.0 114 33.3
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.6e-09 66.6 102 35.3
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 2.7e-09 65.9 109 34.9
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.6e-09 65.5 101 39.6
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-09 65.1 86 39.5
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.7e-09 65.1 117 31.6
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.1e-09 64.7 108 32.4
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.0e-08 62.4 103 37.9
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.0e-08 62.4 107 34.6
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 3.0e-08 62.4 114 31.6
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-08 62.4 105 34.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-08 62.4 104 31.7
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-08 61.2 113 35.4
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 8.8e-08 60.8 118 33.1
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 8.8e-08 60.8 114 35.1
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.5 105 35.2
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 1.5e-07 60.1 114 34.2
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-07 60.1 119 34.5
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-07 59.7 105 33.3
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 2.0e-07 59.7 110 33.6
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.4e-07 58.5 105 30.5
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-07 58.2 92 40.2
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.5e-07 57.8 113 33.6
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.7e-07 57.4 121 33.1
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 57.0 94 36.2
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-06 57.0 94 36.2
Thecc.02G024300 Theobroma cacao HOM05D002599 ORTHO05D012670 1.3e-06 57.0 110 28.2
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-06 56.6 105 28.6
Sabra03G0009200 Salix brachista HOM05D002599 ORTHO05D001895 3.7e-06 55.5 125 28.8
Sabra03G0009800 Salix brachista HOM05D002599 ORTHO05D001895 3.7e-06 55.5 125 28.8
Gorai.012G168800 Gossypium raimondii HOM05D002599 ORTHO05D036327 6.3e-06 54.7 93 36.6
Thecc.02G022700 Theobroma cacao HOM05D002599 ORTHO05D012670 6.3e-06 54.7 110 29.1
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.2e-06 54.3 113 34.5


User provided reference genes

Program Settings