Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.10G124900 Manihot esculenta HOM05D021322 ORTHO05D001895 2.6e-58 228.4 107 100.0
Manes.10G120700 Manihot esculenta HOM05D021322 ORTHO05D001895 6.6e-54 213.8 107 94.4
Manes.10G120901 Manihot esculenta HOM05D021322 ORTHO05D001895 6.0e-47 190.7 106 85.8
Manes.10G125000 Manihot esculenta HOM05D021322 ORTHO05D001895 9.5e-45 183.3 106 83.0
Manes.07G022100 Manihot esculenta HOM05D021322 ORTHO05D001895 1.5e-26 122.9 108 58.3
Manes.07G021900 Manihot esculenta HOM05D021322 ORTHO05D001895 9.9e-26 120.2 108 55.6
COL.COLO4_11751 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.9e-13 79.3 106 39.6
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 8.2e-12 73.9 108 38.9
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-11 72.4 109 38.5
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.4e-11 72.4 109 38.5
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.3e-11 71.2 105 37.1
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.3e-11 71.2 107 38.3
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 9.0e-11 70.5 107 36.4
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-10 70.1 106 33.0
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 4.5e-10 68.2 103 37.9
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.8e-10 67.8 109 36.7
Thecc.02G024900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.9e-09 65.5 109 33.0
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.8e-09 65.1 106 36.8
Potri.003G010730 Populus trichocarpa HOM05D011361 ORTHO05D015735 8.4e-09 63.9 110 35.5
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 1.4e-08 63.2 105 33.3
Gohir.D04G176000 Gossypium hirsutum HOM05D019153 ORTHO05D047868 1.9e-08 62.8 105 33.3
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 1.9e-08 62.8 107 35.5
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.9e-08 62.8 102 34.3
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 2.5e-08 62.4 106 35.8
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.1e-08 60.8 104 34.6
Sabra03G0005600 Salix brachista HOM05D011361 ORTHO05D015735 9.3e-08 60.5 110 36.4
Sabra03G0005700 Salix brachista HOM05D011361 ORTHO05D015735 9.3e-08 60.5 110 36.4
Potri.003G010565 Populus trichocarpa HOM05D011361 ORTHO05D015735 2.1e-07 59.3 110 32.7
Potri.003G010598 Populus trichocarpa HOM05D011361 ORTHO05D015735 2.1e-07 59.3 110 32.7
Potri.003G010763 Populus trichocarpa HOM05D008353 ORTHO05D001895 2.1e-07 59.3 106 33.0
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-07 58.9 106 34.0
Thecc.02G091500 Theobroma cacao HOM05D008353 ORTHO05D001895 4.6e-07 58.2 110 34.5
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.9e-07 57.4 106 33.0
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 7.9e-07 57.4 104 31.7
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-06 56.6 106 33.0
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-06 55.5 105 32.4
Potri.003G010664 Populus trichocarpa HOM05D011361 ORTHO05D015735 3.9e-06 55.1 116 31.9
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-06 54.3 104 30.8
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-06 54.3 104 30.8
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.7e-06 54.3 104 30.8


User provided reference genes

Program Settings